RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 GPX5O75715 221 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MAPK8P45983 427 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SMSP52788 366 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 PTSQ03393 145 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ANGPT1Q15389 498 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 GRK1Q15835 563 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 C6orf136Q5SQH8 315 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 TRIQKQ629K1 86 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 KDM4DQ6B0I6 523 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MILR1Q7Z6M3 343 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 OR52H1Q8NGJ2 320 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 CEP76Q8TAP6 659 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 IRF7Q92985 503 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SCAMP4Q969E2 229 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SGTBQ96EQ0 304 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MGLLQ99685 303 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SEC22CQ9BRL7 303 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 IPPKQ9H8X2 491 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 DCAF13Q9NV06 445 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 B4GALT6Q9UBX8 382 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 REV1Q9UBZ9 1251 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 PRKAG2Q9UGJ0 569 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 CYB5R1Q9UHQ9 305 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ZNF451Q9Y4E5 1061 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 PIKFYVEQ9Y2I7 2098 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 A0A075B6Q4 140 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 GRM6O15303 877 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MRPS14O60783 128 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 SCELO95171 688 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 UROSP10746 265 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MYOGP15173 224 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 RECQLP46063 649 aaPredicted RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 MAN2A2P49641 1150 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 EPHA5P54756 1037 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ERVK-8P63133 956 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ARHGEF7Q14155 803 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 LARS2Q15031 903 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 TIMM50Q3ZCQ8 353 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 LCN1P1Q5VSP4 162 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 OR2T5Q6IEZ7 315 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 TPRG1Q6ZUI0 275 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 USP45Q70EL2 814 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 GOLGA7Q7Z5G4 137 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 NXPE1Q8N323 547 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 OR4F6Q8NGB9 312 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 OR2T29Q8NH02 315 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SCRN2Q96FV2 425 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 PYURFQ96I23 114 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SIGLEC11Q96RL6 698 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 CLEC4MQ9H2X3 399 aaPredicted RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ENOPH1Q9UHY7 261 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ING4Q9UNL4 249 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 CLCA1A8K7I4 914 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 PLOD3O60568 738 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MOSPD3O75425 235 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 PAHP00439 452 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 CHRM5P08912 532 aaPredicted RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 RORCP51449 518 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 GTF2H2Q13888 395 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 GTF2H2CQ6P1K8 395 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ZBTB2Q8N680 514 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 UTP15Q8TED0 518 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 MTFMTQ96DP5 389 aaKnown RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 LINC00052Q96N35 136 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 FOPNLQ96NB1 174 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 COL21A1Q96P44 957 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 FAM126AQ9BYI3 521 aaPredicted RBP13.36□□□□□ -0.27
LIG1-203ENST00000536218 SLAMF7Q9NQ25 335 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ELOVL2Q9NXB9 296 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 ZIM2Q9NZV7 527 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 MAFFQ9ULX9 164 aa13.36□□□□□ -0.27
LIG1-203ENST00000536218 LOC102723532A0A0G2JNH3 316 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 DGKAP23743 735 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 AKT1P31749 480 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 INPP1P49441 399 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 OLR1P78380 273 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 EXOSC2Q13868 293 aaKnown RBP13.35□□□□□ -0.27
LIG1-203ENST00000536218 C10orf62Q5T681 223 aaPredicted RBP13.35□□□□□ -0.27
LIG1-203ENST00000536218 HDDC2Q7Z4H3 204 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 RNF130Q86XS8 419 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 CHPFQ8IZ52 775 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 DNAJC22Q8N4W6 341 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 OR8K5Q8NH50 307 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
LIG1-203ENST00000536218 SPHK2Q9NRA0 654 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 POLR3HQ9Y535 204 aaPredicted RBP13.35□□□□□ -0.27
LIG1-203ENST00000536218 SGTAO43765 313 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 KLK8O60259 260 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 POP4O95707 220 aaKnown RBP13.35□□□□□ -0.27
LIG1-203ENST00000536218 NPPAP01160 153 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 RAF1P04049 648 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 ARSBP15848 533 aa13.35□□□□□ -0.27
LIG1-203ENST00000536218 GBX2P52951 348 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms