RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CCDC71Q8IV32 467 aaPredicted RBP12.72□□□□□ -0.37
VPS33B-202ENST00000535906 RAB42Q8N4Z0 105 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 IL17RCQ8NAC3 791 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 RGMAQ96B86 450 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 YIPF6Q96EC8 236 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 ZNF347Q96SE7 839 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 APOOQ9BUR5 198 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 PITHD1Q9GZP4 211 aaPredicted RBP12.72□□□□□ -0.37
VPS33B-202ENST00000535906 NECTIN3Q9NQS3 549 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 PRDM8Q9NQV8 689 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 SNX11Q9Y5W9 270 aa12.72□□□□□ -0.37
VPS33B-202ENST00000535906 A0A1W2PQF6 199 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 PDZK1P1A8MUH7 402 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 MAN1A2O60476 641 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 STATHP02808 62 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 HOXB3P14651 431 aaPredicted RBP12.71□□□□□ -0.37
VPS33B-202ENST00000535906 PKLRP30613 574 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 SERPINB1P30740 379 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 MASP1P48740 699 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 PCBP4P57723 403 aaKnown RBP12.71□□□□□ -0.37
VPS33B-202ENST00000535906 MVKQ03426 396 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 KRT33BQ14525 404 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 LINC00299Q6ZSB3 139 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 NUDT13Q86X67 352 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 OR52E1Q8NGJ3 308 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 OR52J3Q8NH60 311 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 CREB3L4Q8TEY5 395 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 UBE2FQ969M7 185 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 TEFMQ96QE5 360 aaKnown RBP12.71□□□□□ -0.37
VPS33B-202ENST00000535906 GABRG3Q99928 467 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 MACROD1Q9BQ69 325 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 MSRAQ9UJ68 235 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 CCDC88CQ9P219 2028 aa12.71□□□□□ -0.37
VPS33B-202ENST00000535906 J3KTA2 159 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 TNFRSF11BO00300 401 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 PDPK1O15530 556 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 RGS10O43665 173 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 TBX19O60806 448 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 PRAMEF10O60809 474 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 B4GALT2O60909 372 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 MT-ND2P03891 347 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 HNRNPCP07910 306 aaKnown RBP eCLIP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 DSTNP60981 165 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 PPP2CBP62714 309 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 PPP2CAP67775 309 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 RPP38P78345 283 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 HSPB3Q12988 150 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 ELOAQ14241 798 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 SMN1Q16637 294 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 UAP1L1Q3KQV9 507 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 HORMAD2Q8N7B1 307 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 OR2L8Q8NGY9 312 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 SNRNP27Q8WVK2 155 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 IPCEF1Q8WWN9 437 aaPredicted RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 OR5P2Q8WZ92 322 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 EXOSC8Q96B26 276 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 SH3YL1Q96HL8 342 aaPredicted RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 GABARAPL3Q9BY60 117 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 DDX31Q9H8H2 851 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 RMI1Q9H9A7 625 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 FGF22Q9HCT0 170 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 SCHIP1Q9P0W5 487 aaPredicted RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 RAB23Q9ULC3 237 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 ERGIC3Q9Y282 383 aa12.71□□□□□ -0.38
VPS33B-202ENST00000535906 WBP11Q9Y2W2 641 aaKnown RBP12.71□□□□□ -0.38
VPS33B-202ENST00000535906 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 LRIT2A6NDA9 550 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 POM121BA6NF01 834 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 WASHC1A8K0Z3 465 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ADAMDEC1O15204 470 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 FAM20BO75063 409 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SULT1C4O75897 302 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 FUT4P22083 530 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 KRT20P35900 424 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 OPRL1P41146 370 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 FRKP42685 505 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 OCA2Q04671 838 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ADAM15Q13444 863 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 SAXO2Q658L1 398 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 OR4C11Q6IEV9 310 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 TNFAIP8L2Q6P589 184 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-202ENST00000535906 WASH2PQ6VEQ5 465 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 ZNF793Q6ZN11 406 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 CENPSQ8N2Z9 138 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 NEURL3Q96EH8 262 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 VMP1Q96GC9 406 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 PDXPQ96GD0 296 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 QRFPRQ96P65 431 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 FEVQ99581 238 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 C17orf62Q9BQA9 187 aa12.7□□□□□ -0.38
VPS33B-202ENST00000535906 RHNO1Q9BSD3 238 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms