RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ACOXLQ9NUZ1 547 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 IL20Q9NYY1 176 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 COX16Q9P0S2 106 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 OR12D3Q9UGF7 316 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 SLCO3A1Q9UIG8 710 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 TBX21Q9UL17 535 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 NDRG4Q9ULP0 352 aaKnown RBP6.31□□□□□ -1.4
USP28-202ENST00000535607 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP28-202ENST00000535607 UBQLN1Q9UMX0 589 aaKnown RBP6.31□□□□□ -1.4
USP28-202ENST00000535607 VPS4AQ9UN37 437 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 ING4Q9UNL4 249 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 PIN4Q9Y237 131 aaKnown RBP6.31□□□□□ -1.4
USP28-202ENST00000535607 KLHL20Q9Y2M5 609 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 CITO14578 2027 aa6.31□□□□□ -1.4
USP28-202ENST00000535607 LOC100506127A0A0U1RQW1 187 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CLCA1A8K7I4 914 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 MYO1GB0I1T2 1018 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PER2O15055 1255 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 B4GALT5O43286 388 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 B3GALT2O43825 422 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PQBP1O60828 265 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 PMPCBO75439 489 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 RHOBTB1O94844 696 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 OTCP00480 354 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 C1QBP02746 253 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ALPPP05187 535 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 FABP3P05413 133 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CDK1P06493 297 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 RPS17P08708 135 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 CLTBP09497 229 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 IQCF3P0C7M6 154 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PRKAR1AP10644 381 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CTRB1P17538 263 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 KCNA5P22460 613 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CPN2P22792 545 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 BDNFP23560 247 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 MYL9P24844 172 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PTBP1P26599 531 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP28-202ENST00000535607 TGFBR2P37173 567 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PIGAP37287 484 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 HTR2BP41595 481 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 SLC9A3P48764 834 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 INPP1P49441 399 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CXCR3P49682 368 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 TAF6P49848 677 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CLCNKBP51801 687 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 MAP2K6P52564 334 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 HK3P52790 923 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 DIO3P55073 304 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CLRN1P58418 232 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 SRP54P61011 504 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 RAB14P61106 215 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ADAM8P78325 824 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 GALK2Q01415 458 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 TSPY1Q01534 308 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PIGFQ07326 219 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ABHD18Q0P651 414 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 MAB21L1Q13394 359 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 TNK1Q13470 666 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 TSNQ15631 228 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 AAK1Q2M2I8 961 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CDONQ4KMG0 1287 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 LRRC66Q68CR7 880 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 KDM4DQ6B0I6 523 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CTRB2Q6GPI1 263 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 METTL2BQ6P1Q9 378 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 PLET1Q6UQ28 207 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CYP20A1Q6UW02 462 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 DLEU7Q6UYE1 221 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 RANBP10Q6VN20 620 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 LCNL1Q6ZST4 164 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 FAM92BQ6ZTR7 304 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 AHSA2Q719I0 299 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 SNX20Q7Z614 316 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 RBM23Q86U06 439 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 MFSD6LQ8IWD5 586 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ESX1Q8N693 406 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ZNF548Q8NEK5 533 aaPredicted RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 OR52K2Q8NGK3 314 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PPP1R35Q8TAP8 253 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 LRRC20Q8TCA0 184 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PROKR1Q8TCW9 393 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ZNF675Q8TD23 568 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 CLEC4CQ8WTT0 213 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ST8SIA2Q92186 375 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 SLC7A6Q92536 515 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ERLEC1Q96DZ1 483 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 SLC35A4Q96G79 324 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 PDLIM5Q96HC4 596 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 ITCHQ96J02 903 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ST6GAL2Q96JF0 529 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 HYLS1Q96M11 299 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 ZNF583Q96ND8 569 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 WDFY2Q96P53 400 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 TRNT1Q96Q11 434 aaKnown RBP6.3□□□□□ -1.4
USP28-202ENST00000535607 RAD9AQ99638 391 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 EPYCQ99645 322 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 MRI1Q9BV20 369 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 COLEC11Q9BWP8 271 aa6.3□□□□□ -1.4
USP28-202ENST00000535607 TTLL2Q9BWV7 592 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms