RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IRF9Q00978 393 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ID2Q02363 134 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 SLAMF1Q13291 335 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 DDX39BQ13838 428 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 ACAP2Q15057 778 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 CDSNQ15517 529 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 PFKFB4Q16877 469 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ZNF750Q32MQ0 723 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 CMPK2Q5EBM0 449 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 NCCRP1Q6ZVX7 275 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 ZNF572Q7Z3I7 529 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 CCDC91Q7Z6B0 441 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 FGD2Q7Z6J4 655 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 OR4N5Q8IXE1 308 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 GPALPP1Q8IXQ4 340 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 EID3Q8N140 333 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 RNF175Q8N4F7 328 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ZNF321PQ8N8H1 164 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 C7orf57Q8NEG2 295 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 OR5L2Q8NGL0 311 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 OR8K3Q8NH51 312 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 HUS1BQ8NHY5 278 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 RGMAQ96B86 450 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ANKRD9Q96BM1 317 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 MTFMTQ96DP5 389 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 RBM18Q96H35 190 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 RASL10BQ96S79 203 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 MTERF1Q99551 399 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 VKORC1Q9BQB6 163 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 CENPKQ9BS16 269 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 LRRC1Q9BTT6 524 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 SORBS1Q9BX66 1292 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 RPF2Q9H7B2 306 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 SNX15Q9NRS6 342 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 DEPPQ9NTK1 212 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 A0A096LPK6 155 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 CCDC189A1A4V9 331 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 PDE9AO76083 593 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 KLHL2O95198 593 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ETHE1O95571 254 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 TPOP07202 933 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 COX6B1P14854 86 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 PTX3P26022 381 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 TYK2P29597 1187 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 TLX1P31314 330 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 SOX3P41225 446 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 RAP1GDS1P52306 607 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ALDH18A1P54886 795 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 PLGLB1Q02325 96 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 BIKQ13323 160 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 SETDB1Q15047 1291 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 UAP1Q16222 522 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 LIPJQ5W064 366 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 GRHL2Q6ISB3 625 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 C8orf74Q6P047 294 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 GPR180Q86V85 440 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 OR52N2Q8NGI0 321 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 FAM57AQ8TBR7 257 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 SLC2A12Q8TD20 617 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 PHF10Q8WUB8 498 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 PPWD1Q96BP3 646 aaKnown RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 SENP5Q96HI0 755 aaPredicted RBP8.27□□□□□ -1.09
COPB1-211ENST00000534234 DMRTA2Q96SC8 542 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 DEFB127Q9H1M4 99 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 IPPKQ9H8X2 491 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ACTR8Q9H981 624 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 ZDHHC18Q9NUE0 388 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 MS4A12Q9NXJ0 267 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 COPS7AQ9UBW8 275 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 PPT2Q9UMR5 302 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 PCDHGA11Q9Y5H2 935 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 HRH3Q9Y5N1 445 aa8.27□□□□□ -1.09
COPB1-211ENST00000534234 CPAMD8Q8IZJ3 1885 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 SVILO95425 2214 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 MYO9AB2RTY4 2548 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 PINLYPA6NC86 204 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 LRRC14BA6NHZ5 514 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 G3V3Y1 287 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 H0YIV9 168 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 C19orf84I3L1E1 186 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 FGF17O60258 216 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 KLK8O60259 260 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 COX7A2P14406 83 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 CNR1P21554 472 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 PHBP35232 272 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 PTGER4P35408 488 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 STT3AP46977 705 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 NR0B1P51843 470 aaKnown RBP8.26□□□□□ -1.09
COPB1-211ENST00000534234 ARFIP1P53367 373 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 RPS13P62277 151 aaKnown RBP8.26□□□□□ -1.09
COPB1-211ENST00000534234 PPIAP62937 165 aaKnown RBP8.26□□□□□ -1.09
COPB1-211ENST00000534234 IGLV3-21P80748 117 aaPredicted RBP8.26□□□□□ -1.09
COPB1-211ENST00000534234 CKAP4Q07065 602 aaKnown RBP8.26□□□□□ -1.09
COPB1-211ENST00000534234 GTF2H2Q13888 395 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 PCBP2Q15366 365 aaKnown RBP eCLIP8.26□□□□□ -1.092e-11■■■■■ 33.8
COPB1-211ENST00000534234 CPSF6Q16630 551 aaKnown RBP eCLIP8.26□□□□□ -1.09
COPB1-211ENST00000534234 GTF2H2CQ6P1K8 395 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 ARHGAP11AQ6P4F7 1023 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 KLC3Q6P597 504 aa8.26□□□□□ -1.09
COPB1-211ENST00000534234 PAOXQ6QHF9 649 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms