RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PDXPQ96GD0 296 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 EPS8L2Q9H6S3 715 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 EXOSC4Q9NPD3 245 aaKnown RBP15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 CACNB4O00305 520 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 BTN3A3O00478 584 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 BCAS1O75363 584 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 NADKO95544 446 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 HOXB9P17482 250 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 PCGF2P35227 344 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 KDM4DQ6B0I6 523 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 TM4SF18Q96CE8 201 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 EHD1Q9H4M9 534 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 TIMMDC1Q9NPL8 285 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 SEMA3GQ9NS98 782 aa15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 SCHIP1Q9P0W5 487 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-224ENST00000533801 ADAMDEC1O15204 470 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 CXCR2P25025 360 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 DPTQ07507 201 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 SLAMF1Q13291 335 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 AQP6Q13520 282 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 PIN1Q13526 163 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 TMEM52BQ4KMG9 183 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 SOWAHCQ53LP3 525 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 TJAP1Q5JTD0 557 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 C18orf63Q68DL7 685 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 TMEM107Q6UX40 140 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 ZNF605Q86T29 641 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 CCDC71Q8IV32 467 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 LAS2Q8IYD9 372 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 SLC38A5Q8WUX1 472 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 PATE1Q8WXA2 126 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 C7orf34Q96L11 122 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 USE1Q9NZ43 259 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 LTBP2Q14767 1821 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 PGRMC2O15173 223 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 STSP08842 583 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 DBTP11182 482 aaKnown RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 FCARP24071 287 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 MAPK9P45984 424 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 GP2P55259 537 aaKnown RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 VEZF1Q14119 521 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 NR1D2Q14995 579 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 GPR19Q15760 415 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 ZNF776Q68DI1 518 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 SFTPA2Q8IWL1 248 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 RGMAQ96B86 450 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 SIPA1Q96FS4 1042 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 ZNF300Q96RE9 604 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 MYNNQ9NPC7 610 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 HAT1O14929 419 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 TTKP33981 857 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 ST13P50502 369 aaKnown RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 MAD2L1BPQ15013 274 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 UNC5DQ6UXZ4 953 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 DEFB119Q8N690 84 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 PJA1Q8NG27 643 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 HMGB4Q8WW32 186 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 C11orf24Q96F05 449 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 TEFMQ96QE5 360 aaKnown RBP15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 ALPK1Q96QP1 1244 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 GDE1Q9NZC3 331 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 TMCC3Q9ULS5 477 aa15.14■□□□□ 0.01
ATP2C1-224ENST00000533801 C17orf113A0A1B0GUU1 675 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 PRAMEF25A6NGN4 478 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 FOXE1O00358 373 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 GSTM2P28161 218 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 BTN3A2P78410 334 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 ALDH6A1Q02252 535 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 MED22Q15528 200 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 TOR1AIP1Q5JTV8 583 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 ANKRD54Q6NXT1 300 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 LCTLQ6UWM7 567 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 MSANTD1Q6ZTZ1 278 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 LRRC56Q8IYG6 542 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 IQCF1Q8N6M8 205 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 KCT2Q8NC54 265 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 EZH1Q92800 747 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 WFDC6Q9BQY6 131 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 MS4A8Q9BY19 250 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 C1GALT1Q9NS00 363 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 TBC1D23Q9NUY8 699 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 ATP6V1HQ9UI12 483 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 PSME2Q9UL46 239 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 RNF6Q9Y252 685 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 TRBV4-1A0A0J9YWV2 114 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 EML2O95834 649 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 HNRNPCP07910 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 DDCP20711 480 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 DCKP27707 260 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 MVDP53602 400 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 RPS3AP61247 264 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 DBPQ10586 325 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 SYCE2Q6PIF2 218 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 RNF165Q6ZSG1 346 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 ENTHD1Q8IYW4 607 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 SLC15A4Q8N697 577 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 C16orf58Q96GQ5 468 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 EPHX3Q9H6B9 360 aa15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 NFKBIL1Q9UBC1 381 aaPredicted RBP15.13■□□□□ 0.01
ATP2C1-224ENST00000533801 H3BQ06 376 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms