RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PHF11Q9UIL8 331 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 PPT2Q9UMR5 302 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 ZGRF1Q86YA3 2104 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 SP1P08047 785 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 MST1P26927 711 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 BSGP35613 385 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 HLCSP50747 726 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 ID2Q02363 134 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 SRSF11Q05519 484 aaKnown RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 TTC19Q6DKK2 380 aaPredicted RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 SLC25A25Q6KCM7 469 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 RPS27LQ71UM5 84 aaKnown RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 MILR1Q7Z6M3 343 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 MORN4Q8NDC4 146 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 ZNF483Q8TF39 744 aaPredicted RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 C1QTNF3Q9BXJ4 246 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 RPF2Q9H7B2 306 aaKnown RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 DDX31Q9H8H2 851 aaKnown RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 TMEM216Q9P0N5 145 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 ATG4BQ9Y4P1 393 aa28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 SPTBN1Q01082 2364 aaKnown RBP28.22■■■□□ 2.11
SSSCA1-207ENST00000533115 EEDO75530 441 aaKnown RBP28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 SLC25A12O75746 678 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 ZFAND5O76080 213 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 GP1BBP13224 206 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 TNNI3P19429 210 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 TAC1P20366 129 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 TNFRSF17Q02223 184 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 GGTA1PQ4G0N0 100 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 FRG2Q64ET8 278 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 GALNTL5Q7Z4T8 443 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 CNPY4Q8N129 248 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 OR4F6Q8NGB9 312 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 FRG2BQ96QU4 278 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 SERPINI1Q99574 410 aa28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 LYARQ9NX58 379 aaKnown RBP28.21■■■□□ 2.11
SSSCA1-207ENST00000533115 A0A0A6YYD5 115 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 WIPF3A6NGB9 483 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 C17orf105B2RV13 164 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 FGF17O60258 216 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 PRKNO60260 465 aaPredicted RBP28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 LDLRP01130 860 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 TLX1P31314 330 aaPredicted RBP28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 HNRNPH2P55795 449 aaKnown RBP28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 IGLV3-21P80748 117 aaPredicted RBP28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 C10orf62Q5T681 223 aaPredicted RBP28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 C18orf63Q68DL7 685 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 MRM1Q6IN84 353 aaKnown RBP28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 ZNF227Q86WZ6 799 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 OR4N5Q8IXE1 308 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 ACMSDQ8TDX5 336 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 TANKQ92844 425 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 ASB4Q9Y574 426 aa28.2■■■□□ 2.1
SSSCA1-207ENST00000533115 ASPDHA6ND91 283 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 PROM1O43490 865 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 ITGA10O75578 1167 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 SEMA3DO95025 777 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 OTCP00480 354 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 BUD31P41223 144 aaPredicted RBP28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 CDH13P55290 713 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 KCNK10P57789 538 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 IFT88Q13099 833 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 MAPKAPK3Q16644 382 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 C4orf17Q53FE4 359 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 CYP20A1Q6UW02 462 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 GFRALQ6UXV0 394 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 NUDT13Q86X67 352 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 MZB1Q8WU39 189 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 TBK1Q9UHD2 729 aa28.19■■■□□ 2.1
SSSCA1-207ENST00000533115 ICE1Q9Y2F5 2266 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 A0A1B0GTL3 188 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 GOLGA8RI6L899 631 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 PPP6CO00743 305 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 TMPRSS11DO60235 418 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 NME2P1O60361 137 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 FAM58BPP0C7Q3 252 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 NME2P22392 152 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 STT3AP46977 705 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 HERVK_113P63132 956 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 BIKQ13323 160 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 HSDL2Q6YN16 418 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 TMEM156Q8N614 296 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 FAM98AQ8NCA5 519 aaKnown RBP28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 SLC2A12Q8TD20 617 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 TMEM125Q96AQ2 219 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 ERVK-6Q9BXR3 956 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 OR8D2Q9GZM6 311 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 ELOVL6Q9H5J4 265 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 SEC14L3Q9UDX4 400 aa28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 YARS2Q9Y2Z4 477 aaKnown RBP28.18■■■□□ 2.1
SSSCA1-207ENST00000533115 DOPEY1Q5JWR5 2465 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 TMEM200CA6NKL6 621 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 LRRTM2O43300 516 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 PRKRAO75569 313 aaKnown RBP28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 UNC5CO95185 931 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 STSP08842 583 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 PYGBP11216 843 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 COX7A2P14406 83 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 TSPAN8P19075 237 aa28.17■■■□□ 2.1
SSSCA1-207ENST00000533115 TNFRSF8P28908 595 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms