RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RCN2Q14257 317 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 SLBPQ14493 270 aaKnown RBP eCLIP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 DAZAP2Q15038 168 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 C18orf21Q32NC0 220 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 TRIM40Q6P9F5 258 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 TMIGD1Q6UXZ0 262 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 PRIMA1Q86XR5 153 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 SCUBE1Q8IWY4 988 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 OR4N5Q8IXE1 308 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 FBXW8Q8N3Y1 598 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 GOLM1Q8NBJ4 401 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 SPC24Q8NBT2 197 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 NAXEQ8NCW5 288 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 OR14A16Q8NHC5 309 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 PTPMT1Q8WUK0 201 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 GAL3ST3Q96A11 431 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 MAGOHBQ96A72 148 aaKnown RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 PPWD1Q96BP3 646 aaKnown RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 MS4A6EQ96DS6 147 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 SERPINB12Q96P63 405 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 TRIB1Q96RU8 372 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 CSF3RQ99062 836 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 NPLQ9BXD5 320 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 AICDAQ9GZX7 198 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 COPS7AQ9UBW8 275 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 VTI1BQ9UEU0 232 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 BOKQ9UMX3 212 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 PPIEQ9UNP9 301 aaKnown RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 VWA7Q9Y334 891 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-206ENST00000531430 LRIT2A6NDA9 550 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 CLCA1A8K7I4 914 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 FAM171A2A8MVW0 826 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 AHRRA9YTQ3 701 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 CDC7O00311 574 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 ETHE1O95571 254 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 EPPINO95925 133 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 HEXAP06865 529 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 MLNP12872 115 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 ENDOUP21128 410 aaKnown RBP8.51□□□□□ -1.05
NEDD8-206ENST00000531430 GDF1P27539 372 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 GABRB3P28472 473 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 MTTPP55157 894 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 LIM2P55344 173 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 DUSP8Q13202 625 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.051e-8■■■□□ 18.3
NEDD8-206ENST00000531430 PIGGQ5H8A4 983 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 HP1BP3Q5SSJ5 553 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SEM1Q6ZVN7 128 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 FRA10AC1Q70Z53 315 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 MAATS1Q7Z4T9 603 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 KRT78Q8N1N4 520 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 C2CD4AQ8NCU7 369 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-206ENST00000531430 MCUQ8NE86 351 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 NEIL3Q8TAT5 605 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SLC22A8Q8TCC7 542 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SLC2A12Q8TD20 617 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 F2RL3Q96RI0 385 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SERINC2Q96SA4 455 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SH3GL2Q99962 352 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 REXO4Q9GZR2 422 aaKnown RBP8.51□□□□□ -1.05
NEDD8-206ENST00000531430 ZFP64Q9NPA5 681 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 LZTFL1Q9NQ48 299 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 SLC17A6Q9P2U8 582 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 FOXD3Q9UJU5 478 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-206ENST00000531430 IKZF3Q9UKT9 509 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 ZKSCAN5Q9Y2L8 839 aa8.51□□□□□ -1.05
NEDD8-206ENST00000531430 FREM3P0C091 2139 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 IQANK1A0A1B0GTG1 560 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 NPEPPSL1A6NEC2 478 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 NCF1BA6NI72 391 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 NCF1CA8MVU1 366 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 H7C1Q1 480 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 CYR61O00622 381 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 DYRK3O43781 588 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 SMPD2O60906 423 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 COX7A2P14406 83 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 NCF1P14598 390 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 GNAZP19086 355 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 RPL21P46778 160 aaKnown RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 CPA2P48052 419 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 PPP2R2BQ00005 443 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 TGM3Q08188 693 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 SERTAD2Q14140 314 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 HYAL4Q2M3T9 481 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 SHEQ5VZ18 495 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 LUZP2Q86TE4 346 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 AGGF1Q8N302 714 aaeCLIP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 CIARTQ8N365 385 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 RASGEF1CQ8N431 466 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 TTLQ8NG68 377 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 OR2L5Q8NG80 312 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 DIO2Q92813 273 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 RBM18Q96H35 190 aaKnown RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 SENP5Q96HI0 755 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-206ENST00000531430 DGAT2Q96PD7 388 aa8.5□□□□□ -1.05
NEDD8-206ENST00000531430 GAL3ST4Q96RP7 486 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms