RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 RPF2Q9H7B2 306 aaKnown RBP12.53□□□□□ -0.4
CAPN1-215ENST00000528396 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 MID1IP1Q9NPA3 183 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 PLA2G3Q9NZ20 509 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 KCMF1Q9P0J7 381 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
CAPN1-215ENST00000528396 TRAV17A0A0B4J275 112 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 MYOCOSA0A1B0GUC4 107 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 H3BQF6 201 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 LDB3O75112 727 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 GUCY1B2O75343 617 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 VPS4BO75351 444 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 SPAG7O75391 227 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 EEDO75530 441 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 WISP1O95388 367 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 ESRRBO95718 433 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 F10P00742 488 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 GBAP04062 536 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 KLK1P06870 262 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 BSGP35613 385 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 CLCN2P51788 898 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 MAPK12P53778 367 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 DNAJB13P59910 316 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 ID2Q02363 134 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 INPP5JQ15735 1006 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 LIPMQ5VYY2 423 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 Q6ZS92 163 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 CROCCP2Q86T23 111 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 OR1N1Q8NGS0 311 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 RBM18Q96H35 190 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 DGAT2Q96PD7 388 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 C12orf65Q9H3J6 166 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 DDX31Q9H8H2 851 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 FARSBQ9NSD9 589 aaKnown RBP12.52□□□□□ -0.41
CAPN1-215ENST00000528396 OXSMQ9NWU1 459 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 VPS29Q9UBQ0 182 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 COPS7AQ9UBW8 275 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 VPS4AQ9UN37 437 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 PLLPQ9Y342 182 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 TENM4Q6N022 2769 aa12.52□□□□□ -0.41
CAPN1-215ENST00000528396 FLNCQ14315 2725 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 A0A0A6YYD5 115 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 A0A1B0GTL3 188 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 OR5H15A6NDH6 313 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 FCHO1O14526 889 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 OR10H2O60403 315 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 WDPCPO95876 746 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 HSD3B1P14060 373 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 HSD3B2P26439 372 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 HNRNPH2P55795 449 aaKnown RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 PLIN5Q00G26 463 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 OC90Q02509 493 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 KCNC4Q03721 635 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 CSTF3Q12996 717 aaKnown RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 BIKQ13323 160 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 IGFBP7Q16270 282 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 IMPG1Q17R60 797 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 FRMD7Q6ZUT3 714 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 COMMD6Q7Z4G1 85 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 CUZD1Q86UP6 607 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 RPS19BP1Q86WX3 136 aaKnown RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 CRLF3Q8IUI8 442 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 OR4N5Q8IXE1 308 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 BEST3Q8N1M1 668 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 KIF2BQ8N4N8 673 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 CISD2Q8N5K1 135 aaKnown RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 HORMAD2Q8N7B1 307 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 GBP7Q8N8V2 638 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 BANPQ8N9N5 519 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 Q8NA96 180 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 ELP5Q8TE02 316 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 AGAP11Q8TF27 550 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 HAS2Q92819 552 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 NCLNQ969V3 563 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 VMP1Q96GC9 406 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 FAM111AQ96PZ2 611 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 HBEGFQ99075 208 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 TMEM109Q9BVC6 243 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 OR8D2Q9GZM6 311 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 RNF32Q9H0A6 362 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 AGPAT4Q9NRZ5 378 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 MKS1Q9NXB0 559 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 ADAM29Q9UKF5 820 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 ATG4BQ9Y4P1 393 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 CSAG2Q9Y5P2 127 aa12.51□□□□□ -0.41
CAPN1-215ENST00000528396 COPG1Q9Y678 874 aaKnown RBP12.51□□□□□ -0.41
CAPN1-215ENST00000528396 GLOD5A6NK44 160 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 TGFBR3LH3BV60 316 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 PROM1O43490 865 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 TMPRSS11DO60235 418 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 TNFSF10P50591 281 aa12.5□□□□□ -0.41
CAPN1-215ENST00000528396 FOXK1P85037 733 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms