RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 WWOXQ9NZC7 414 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 CD274Q9NZQ7 290 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 RNF112Q9ULX5 631 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 HRH3Q9Y5N1 445 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 SAGE2PA6NJ88 616 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 C4orf51C9J302 202 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 CLDN4O14493 209 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 FCHO1O14526 889 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 PRAMEF4O60810 478 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 TBX6O95947 436 aaPredicted RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 HEXAP06865 529 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 LTA4HP09960 611 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 SLC35E2BP0CK96 405 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 TPP2P29144 1249 aaPredicted RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 ZFP36L2P47974 494 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 KCNC1P48547 511 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 HSPA7P48741 367 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 HLCSP50747 726 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 RUNX2Q13950 521 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 DOC2AQ14183 400 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 TERF2Q15554 542 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 PDK4Q16654 411 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 HIST2H2ACQ16777 129 aaPredicted RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 CMPK2Q5EBM0 449 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 PAGE2BQ5JRK9 111 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 PRAMEF9Q5VWM5 478 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 HIST2H2AA3Q6FI13 130 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 RAPH1Q70E73 1250 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 TBC1D1Q86TI0 1168 aaPredicted RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 CCDC25Q86WR0 208 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 CDC20BQ86Y33 519 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 RELL1Q8IUW5 271 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 SCUBE1Q8IWY4 988 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 PPM1NQ8N819 430 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 SRFBP1Q8NEF9 429 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 C7orf57Q8NEG2 295 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 RHEBL1Q8TAI7 183 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 UBE2E3Q969T4 207 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 ARSGQ96EG1 525 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 SERINC2Q96SA4 455 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 ATOH8Q96SQ7 321 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 TRIM45Q9H8W5 580 aaPredicted RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 NECTIN3Q9NQS3 549 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 ZDHHC18Q9NUE0 388 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 NUDT4Q9NZJ9 180 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 PPIEQ9UNP9 301 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 ACOT9Q9Y305 439 aa9.79□□□□□ -0.84
CPSF1-203ENST00000527916 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
CPSF1-203ENST00000527916 FIGNL2A6NMB9 653 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 FAM47E-STBD1D6RA91 191 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ERI3O43414 337 aaKnown RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 B3GALT2O43825 422 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 PEX1O43933 1283 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 KERAO60938 352 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 PDE9AO76083 593 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 RAF1P04049 648 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 S100BP04271 92 aaPredicted RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 EPORP19235 508 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 MAOAP21397 527 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ACVR2AP27037 513 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 SERPINB1P30740 379 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 TRHRP34981 398 aaPredicted RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 RFC3P40938 356 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 MTTPP55157 894 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 DLX5P56178 289 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 RAB38P57729 211 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 IRF8Q02556 426 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 TGM3Q08188 693 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 DLG1Q12959 904 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 KEAP1Q14145 624 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 RCN2Q14257 317 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 DEFB113Q30KQ7 82 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 SLC25A35Q3KQZ1 300 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 XKR6Q5GH73 641 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 C8orf74Q6P047 294 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 TRIM40Q6P9F5 258 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ABHD17CQ6PCB6 329 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 PAMR1Q6UXH9 720 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 CXXC5Q7LFL8 322 aaKnown RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 LRRC70Q7Z2Q7 622 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 VN1R5Q7Z5H4 357 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 PRIMA1Q86XR5 153 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 SULF2Q8IWU5 870 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ZNF595Q8IYB9 648 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 CYP4X1Q8N118 509 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 C17orf53Q8N3J3 647 aaPredicted RBP9.78□□□□□ -0.84
CPSF1-203ENST00000527916 RPRMLQ8N4K4 120 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 SNX31Q8N9S9 440 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 C16orf52Q8NHV5 167 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 UBTD2Q8WUN7 234 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ESAMQ96AP7 390 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 LRRC1Q9BTT6 524 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 TSPYL1Q9H0U9 437 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 ALG9Q9H6U8 611 aa9.78□□□□□ -0.84
CPSF1-203ENST00000527916 PRDM7Q9NQW5 492 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms