RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 PRRC2CQ9Y520 2896 aaKnown RBP19.23■□□□□ 0.67
VPS28-206ENST00000526734 USP9XQ93008 2570 aaPredicted RBP19.23■□□□□ 0.67
VPS28-206ENST00000526734 SETXQ7Z333 2677 aaKnown RBP19.22■□□□□ 0.67
VPS28-206ENST00000526734 ASPDHA6ND91 283 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 MAN1A2O60476 641 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 NEURL1O76050 574 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 SP1P08047 785 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 PER3P56645 1201 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 HERVK_113P63132 956 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.22■□□□□ 0.67
VPS28-206ENST00000526734 TEX35Q5T0J7 233 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 MILR1Q7Z6M3 343 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 TMEM151AQ8N4L1 468 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 OR8K3Q8NH51 312 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 ART5Q96L15 291 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 ERVK-6Q9BXR3 956 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 EPB41L4BQ9H329 900 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 ELOVL6Q9H5J4 265 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 AHSPQ9NZD4 102 aa19.22■□□□□ 0.67
VPS28-206ENST00000526734 YARS2Q9Y2Z4 477 aaKnown RBP19.22■□□□□ 0.67
VPS28-206ENST00000526734 A0A0A6YYD5 115 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 LDB3O75112 727 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 SLC25A12O75746 678 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 SBK3P0C264 359 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 GP1BBP13224 206 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 TNNI3P19429 210 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 ATP5F1P24539 256 aaPredicted RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 BSGP35613 385 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 STT3AP46977 705 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 PLIN5Q00G26 463 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 C4orf17Q53FE4 359 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 SPINK14Q6IE38 97 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 MRM1Q6IN84 353 aaKnown RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 CYP20A1Q6UW02 462 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 HSDL2Q6YN16 418 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 PAGE2Q7Z2X7 111 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 SLC22A9Q8IVM8 553 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 RNF175Q8N4F7 328 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 OR4F6Q8NGB9 312 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 PTPMT1Q8WUK0 201 aaPredicted RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 ANKRD9Q96BM1 317 aaPredicted RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 NSUN5Q96P11 429 aaKnown RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 CDK15Q96Q40 435 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 ZNF717Q9BY31 904 aaPredicted RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 SEMA4BQ9NPR2 832 aaPredicted RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 ANKRD10Q9NXR5 420 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 COPS7AQ9UBW8 275 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 TRPS1Q9UHF7 1281 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 ZNF223Q9UK11 482 aaPredicted RBP19.21■□□□□ 0.67
VPS28-206ENST00000526734 ADAM29Q9UKF5 820 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 SNX6Q9UNH7 406 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 DOPEY2Q9Y3R5 2298 aa19.21■□□□□ 0.67
VPS28-206ENST00000526734 POLEQ07864 2286 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 C17orf105B2RV13 164 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 NME2P1O60361 137 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 ITGA10O75578 1167 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 STSP08842 583 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 FAM58BPP0C7Q3 252 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 NR2F6P10588 404 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 NME2P22392 152 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 SSR4P51571 173 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 NEK2P51955 445 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 RBPJQ06330 500 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 RASA2Q15283 850 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 TDRPQ86YL5 185 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 TMEM156Q8N614 296 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 POGLUT1Q8NBL1 392 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 LRRN4CLQ8ND94 238 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 OR5L2Q8NGL0 311 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 CCDC126Q96EE4 140 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 DGAT2Q96PD7 388 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 SORBS1Q9BX66 1292 aaKnown RBP19.2■□□□□ 0.66
VPS28-206ENST00000526734 BRF2Q9HAW0 419 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 KLHL1Q9NR64 748 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.2■□□□□ 0.66
VPS28-206ENST00000526734 NMRK1Q9NWW6 199 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 TMEM216Q9P0N5 145 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 DCDC2Q9UHG0 476 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 ERRFI1Q9UJM3 462 aaPredicted RBP19.2■□□□□ 0.66
VPS28-206ENST00000526734 KLF13Q9Y2Y9 288 aaPredicted RBP19.2■□□□□ 0.66
VPS28-206ENST00000526734 ATG4BQ9Y4P1 393 aa19.2■□□□□ 0.66
VPS28-206ENST00000526734 A0A1B0GUH1 482 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 WIPF3A6NGB9 483 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 PROM1O43490 865 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 FGF17O60258 216 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 EEDO75530 441 aaKnown RBP19.19■□□□□ 0.66
VPS28-206ENST00000526734 ETHE1O95571 254 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 LDLRP01130 860 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 HNRNPH2P55795 449 aaKnown RBP19.19■□□□□ 0.66
VPS28-206ENST00000526734 NAA20P61599 178 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 GFRALQ6UXV0 394 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 GALNTL5Q7Z4T8 443 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 GSPT2Q8IYD1 628 aaKnown RBP19.19■□□□□ 0.66
VPS28-206ENST00000526734 SLC2A12Q8TD20 617 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 MZB1Q8WU39 189 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 RBM18Q96H35 190 aaKnown RBP19.19■□□□□ 0.66
VPS28-206ENST00000526734 SEC14L3Q9UDX4 400 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 OSGIN2Q9Y236 505 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 ASB4Q9Y574 426 aa19.19■□□□□ 0.66
VPS28-206ENST00000526734 RELNP78509 3460 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms