RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 TATDN3Q17R31 274 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 LCN1P1Q5VSP4 162 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 PHC2Q8IXK0 858 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 LILRA3Q8N6C8 439 aaPredicted RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 SNAPC3Q92966 411 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 SAMD11Q96NU1 681 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 WRAP53Q9BUR4 548 aaKnown RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 BHLHE41Q9C0J9 482 aaPredicted RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 SUV39H2Q9H5I1 410 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 TXNL4BQ9NX01 149 aaKnown RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 B4GALT6Q9UBX8 382 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 CARD8Q9Y2G2 431 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 YARS2Q9Y2Z4 477 aaKnown RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 GOLGA4Q13439 2230 aaKnown RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 H0YIV9 168 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 PRRG1O14668 218 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 SLC16A5O15375 505 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 SEPT4O43236 478 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 OSMP13725 252 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 PTPN5P54829 565 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 ASAH1Q13510 395 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 CEACAM20Q6UY09 585 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 NEIL2Q969S2 332 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 OR4K3Q96R72 315 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 AP1M2Q9Y6Q5 423 aa13.12□□□□□ -0.31
PCDHB18P-202ENST00000526308 CEP290O15078 2479 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 PDE9AO76083 593 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 ZNF8P17098 575 aaPredicted RBP13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 CD70P32970 193 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 DSTNP60981 165 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 HTRA3P83110 453 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 LMAN2Q12907 356 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 ELMOD2Q8IZ81 293 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 WDR48Q8TAF3 677 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 CHTF18Q8WVB6 975 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 ALG14Q96F25 216 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 KCTD7Q96MP8 289 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 NLNQ9BYT8 704 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 BRF2Q9HAW0 419 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 TRPM7Q96QT4 1865 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 LRRTM2O43300 516 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 HSD3B1P14060 373 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 HSD3B2P26439 372 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 IL18Q14116 193 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SLBPQ14493 270 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SPDYE7PQ495Y7 208 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 YIF1BQ5BJH7 314 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SAXO2Q658L1 398 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 RFPL4BQ6ZWI9 263 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 VN1R5Q7Z5H4 357 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 WDR53Q7Z5U6 358 aaPredicted RBP13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 PEX5LQ8IYB4 626 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SYT14Q8NB59 555 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 RAB8BQ92930 207 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SEMA3GQ9NS98 782 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 NDUFB11Q9NX14 153 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
PCDHB18P-202ENST00000526308 SMLR1H3BR10 107 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 CASKO14936 926 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 CRYZL1O95825 349 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 CKMP06732 381 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 GALTP07902 379 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 TRAPPC2P0DI81 140 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 TRAPPC2BP0DI82 140 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 APEX1P27695 318 aaKnown RBP13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 SPINT3P49223 89 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 LIM2P55344 173 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 BTBD16Q32M84 506 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 ZFP41Q8N8Y5 198 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 CREB3L4Q8TEY5 395 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 RIPOR3Q96MK2 946 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 TM9SF2Q99805 663 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 CTPS2Q9NRF8 586 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 EXO1Q9UQ84 846 aaKnown RBP13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 HSPB11Q9Y547 144 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 IQCMA0A1B0GVH7 501 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 A0A1W2PQ72 361 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 AGAP14A8MT82 685 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 C12orf71A8MTZ7 269 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 ERVH48-1M5A8F1 160 aa13.1□□□□□ -0.31
PCDHB18P-202ENST00000526308 TSPAN6O43657 245 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms