RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NR1D1P20393 614 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 PIK3R1P27986 724 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAPK1P28482 360 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TIA1P31483 386 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 BSGP35613 385 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ALDH9A1P49189 494 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 HTR6P50406 440 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CLCN2P51788 898 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 HNRNPH2P55795 449 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC26A5P58743 744 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAGOHP61326 146 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRA2BP62995 288 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 FOLH1Q04609 750 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 BTKQ06187 659 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 GALNT1Q10472 559 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MFAP5Q13361 173 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 HEPACAMQ14CZ8 416 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 NR6A1Q15406 480 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CHI3L2Q15782 390 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MEP1AQ16819 746 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ARL13AQ5H913 290 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TCHHL1Q5QJ38 904 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SH2D4BQ5SQS7 431 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 NDUFAF5Q5TEU4 345 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CLEC6AQ6EIG7 209 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 PCSK4Q6UW60 755 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 LINC00696Q6ZRV3 163 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZCCHC23Q6ZST2 131 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF605Q86T29 641 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 EXOC3L1Q86VI1 746 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 PTRH1Q86Y79 214 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMEM151BQ8IW70 566 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SCUBE1Q8IWY4 988 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SAMD14Q8IZD0 417 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 LGI4Q8N135 537 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF843Q8N446 348 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SIRT6Q8N6T7 355 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 HORMAD2Q8N7B1 307 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 B3GNT7Q8NFL0 401 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR4K14Q8NGD5 310 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR14A16Q8NHC5 309 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CDC26Q8NHZ8 85 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM76AQ8TAV0 307 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 AGR3Q8TD06 166 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 BRIX1Q8TDN6 353 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 VMP1Q96GC9 406 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 RBM18Q96H35 190 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 METTL2AQ96IZ6 378 aaKnown RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 IMMP1LQ96LU5 166 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 BBC3Q96PG8 261 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 KCNA7Q96RP8 456 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 LMF1Q96S06 567 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CSF3RQ99062 836 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CCT7Q99832 543 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 WDR77Q9BQA1 342 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 GATA5Q9BWX5 397 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ALOXE3Q9BYJ1 711 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 DEFB126Q9BYW3 111 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ACPTQ9BZG2 426 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF552Q9H707 407 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MIEF1Q9NQG6 463 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 NECTIN3Q9NQS3 549 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 KCMF1Q9P0J7 381 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAP10Q9P2G4 905 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 MCM8Q9UJA3 840 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ENTPD4Q9Y227 616 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 B3GNT3Q9Y2A9 372 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATG4BQ9Y4P1 393 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ZNF780BQ9Y6R6 833 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 PTPRQQ9UMZ3 2332 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 ASPMQ8IZT6 3477 aa5.06□□□□□ -1.6
HMGB1P40-201ENST00000525121 SNRNP200O75643 2136 aaKnown RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TRAV17A0A0B4J275 112 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 A0A1B0GTL3 188 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 A0A1W2PR48 441 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 SERTM1A2A2V5 107 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 GLOD5A6NK44 160 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TTLL8A6PVC2 850 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 HMGB1P1B2RPK0 211 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 C17orf105B2RV13 164 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 MASP2O00187 686 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CDK2AP1O14519 115 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 PROM1O43490 865 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TMPRSS11DO60235 418 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 FGF17O60258 216 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 DNAJB6O75190 326 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 SEC22BO75396 215 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 GPR75O95800 540 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRB1P04280 392 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CHRNGP07510 517 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ANXA4P09525 319 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ITGAMP11215 1152 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 DRD2P14416 443 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CREB1P16220 341 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 CSNK2A2P19784 350 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 NT5EP21589 574 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 TPP2P29144 1249 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 ETV4P43268 484 aa5.05□□□□□ -1.6
HMGB1P40-201ENST00000525121 STT3AP46977 705 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms