RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EXOSC2Q13868 293 aaKnown RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 TMEM132DQ14C87 1099 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 EXOSC7Q15024 291 aaKnown RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 AMZ1Q400G9 498 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 LINC01620Q4KN68 170 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 KIAA0895LQ68EN5 471 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 TMEM53Q6P2H8 277 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 TTC27Q6P3X3 843 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 RNASEKQ6P5S7 137 aaKnown RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 TTC23LQ6PF05 361 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 CPEB2Q7Z5Q1 589 aaKnown RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 LINC00523Q86TU6 105 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 FAM124AQ86V42 546 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 MMD2Q8IY49 270 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 MUC20Q8N307 709 aaPredicted RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 GTPBP8Q8N3Z3 284 aaPredicted RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 MAB21L3Q8N8X9 362 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 NPEPL1Q8NDH3 523 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 ZNF548Q8NEK5 533 aaPredicted RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 ZNF596Q8TC21 504 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 GPX8Q8TED1 209 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 ST8SIA1Q92185 356 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 RND1Q92730 232 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 DEFB118Q96PH6 123 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 SLC38A3Q99624 504 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 OMDQ99983 421 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 BBS2Q9BXC9 721 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 FRMD8P1Q9BZ68 369 aaPredicted RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 SPRY4Q9C004 299 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 RIMS4Q9H426 269 aaPredicted RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 C5orf66Q9H5L9 145 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 C10orf88Q9H8K7 445 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 MARCH7Q9H992 704 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 MOV10Q9HCE1 1003 aaKnown RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 CNGB3Q9NQW8 809 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 RNF146Q9NTX7 359 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 SMOXQ9NWM0 555 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 HACD3Q9P035 362 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 STX18Q9P2W9 335 aaKnown RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 LHX3Q9UBR4 397 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 CD300AQ9UGN4 299 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 LCMT1Q9UIC8 334 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 UTS2RQ9UKP6 389 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 NSG2Q9Y328 171 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 SPIN1Q9Y657 262 aaPredicted RBP3.71□□□□□ -1.81
SKP1-209ENST00000522552 SH3TC1Q8TE82 1336 aa3.71□□□□□ -1.81
SKP1-209ENST00000522552 A0A1B0GVL5 298 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 IQCF5A8MTL0 148 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 NPIPB6E9PJ23 425 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 POC1B-GALNT4F8VUJ3 575 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 CLDN5O00501 218 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 NBR2O15453 112 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 DUX1O43812 170 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 PEX1O43933 1283 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 CBR3O75828 277 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 TTLL1O95922 423 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 MBP02144 154 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 APRTP07741 180 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 HIST1H2AGP0C0S8 130 aaPredicted RBP3.71□□□□□ -1.82
SKP1-209ENST00000522552 PRPS2P11908 318 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 FCGR1AP12314 374 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 GP9P14770 177 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 EZRP15311 586 aaKnown RBP3.71□□□□□ -1.82
SKP1-209ENST00000522552 LAP3P28838 519 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 HNRNPH1P31943 449 aaKnown RBP3.71□□□□□ -1.82
SKP1-209ENST00000522552 FOLR3P41439 243 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 KCNJ4P48050 445 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 CCT3P49368 545 aaKnown RBP3.71□□□□□ -1.82
SKP1-209ENST00000522552 MYL6P60660 151 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 PPP2CBP62714 309 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 PPP2CAP67775 309 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 TGFBIQ15582 683 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 EFNB3Q15768 340 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 TEX44Q53QW1 395 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 HSP90AA4PQ58FG1 418 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 ELFN2Q5R3F8 820 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 MLIPQ5VWP3 458 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 SLC25A25Q6KCM7 469 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 KCTD18Q6PI47 426 aaPredicted RBP3.71□□□□□ -1.82
SKP1-209ENST00000522552 G2E3Q7L622 706 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.71□□□□□ -1.82
SKP1-209ENST00000522552 SLC7A5P1Q8MH63 180 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 TEX45Q8NA69 505 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 COLGALT1Q8NBJ5 622 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 OR10Q1Q8NGQ4 319 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 OR14A16Q8NHC5 309 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 CD300LFQ8TDQ1 290 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 SEPT8Q92599 483 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 P3H4Q92791 437 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 SEMA4DQ92854 862 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 RAB1CQ92928 201 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 SLCO2A1Q92959 643 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 HIST1H2ACQ93077 130 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 TOP1MTQ969P6 601 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 SGK3Q96BR1 496 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 ZG16BQ96DA0 208 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 ZNF333Q96JL9 665 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 SIGLEC10Q96LC7 697 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 APOLD1Q96LR9 279 aa3.71□□□□□ -1.82
SKP1-209ENST00000522552 TECTBQ96PL2 329 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms