RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 FAM153AQ9UHL3 310 aa6.67□□□□□ -1.34
SDCBP-208ENST00000520228 DNPEPQ9ULA0 475 aa6.67□□□□□ -1.34
SDCBP-208ENST00000520228 OR1A2Q9Y585 309 aa6.67□□□□□ -1.34
SDCBP-208ENST00000520228 A3GALT2U3KPV4 340 aa6.67□□□□□ -1.34
SDCBP-208ENST00000520228 LAMA1P25391 3075 aa6.67□□□□□ -1.34
SDCBP-208ENST00000520228 SPTBN2O15020 2390 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 A0A0U1RQS6 177 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 C1orf232A0A0U1RR37 186 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 MED19A0JLT2 244 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 FAM90A10PA6NDY2 464 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 NEMP2A6NFY4 417 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 INAFM1C9JVW0 142 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 PSMD11O00231 422 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 CACNB4O00305 520 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 KCNN4O15554 427 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 SDC3O75056 442 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 MT-CYBP00156 380 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 EPOP01588 193 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 ZNF30P17039 623 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 GM2AP17900 193 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 MYF6P23409 242 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 DGKAP23743 735 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 ARRB2P32121 409 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 TRIM23P36406 574 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 ENTPD1P49961 510 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 STC1P52823 247 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 EIF3BP55884 814 aaKnown RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 PPARDQ03181 441 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 PRPSAP1Q14558 356 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 NFATC4Q14934 902 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 NUMA1Q14980 2115 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 ZNF260Q3ZCT1 412 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 DNTTIP2Q5QJE6 756 aaKnown RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 SEL1L2Q5TEA6 688 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 ITPRIPL1Q6GPH6 555 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 PNCKQ6P2M8 343 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 ENPP7Q6UWV6 458 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 MACC1Q6ZN28 852 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 SLC46A3Q7Z3Q1 461 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 SFTPA2Q8IWL1 248 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 SLC25A45Q8N413 288 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 EID2Q8N6I1 236 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 DTD2Q96FN9 168 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 TRIB3Q96RU7 358 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 LYSMD1Q96S90 227 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 WDR26Q9H7D7 661 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 CLK4Q9HAZ1 481 aaKnown RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 IL36RNQ9UBH0 155 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 RSPH14Q9UHP6 348 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 R3HDM2Q9Y2K5 976 aaKnown RBP6.66□□□□□ -1.34
SDCBP-208ENST00000520228 CEP295Q9C0D2 2601 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 EML5Q05BV3 1969 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 THADAQ6YHU6 1953 aa6.66□□□□□ -1.34
SDCBP-208ENST00000520228 DNAH14Q0VDD8 3507 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 A0A087X0M5 115 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 LOC285095A0A1B0GVY8 99 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 A0A1B0GX30 115 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 RGSL1A5PLK6 1076 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 C5orf60A6NFR6 353 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 SCAMP1O15126 338 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ZSCAN12O43309 604 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 LIASO43766 372 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ANXA9O76027 345 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 LDOC1O95751 146 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-208ENST00000520228 TFP02787 698 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 HOXC4P09017 264 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-208ENST00000520228 PIRTP0C851 137 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ALPPL2P10696 532 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 GPR1P46091 355 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 PGGT1BP53609 377 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 GEMP55040 296 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 KIAA1024LP59773 190 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 SRP54P61011 504 aaKnown RBP6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ABATP80404 500 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 Q0VFX4 171 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 RUNX2Q13950 521 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 CDKN3Q16667 212 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ALG11Q2TAA5 492 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ANKRD20A2Q5SQ80 823 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 FNBP1LQ5T0N5 605 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ANKRD20A1Q5TYW2 823 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ANKRD20A3Q5VUR7 823 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 FAAH2Q6GMR7 532 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 LRRC8EQ6NSJ5 796 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 KDELC1Q6UW63 502 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 C1orf122Q6ZSJ8 110 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 RFLNAQ6ZTI6 216 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 MAATS1Q7Z4T9 603 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 GLRX5Q86SX6 157 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 NOXA1Q86UR1 476 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 SLC13A5Q86YT5 568 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-208ENST00000520228 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 PPHLN1Q8NEY8 458 aaKnown RBP6.65□□□□□ -1.34
SDCBP-208ENST00000520228 IPMKQ8NFU5 416 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 CCDC110Q8TBZ0 833 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 LMX1AQ8TE12 382 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 ASB5Q8WWX0 329 aa6.65□□□□□ -1.34
SDCBP-208ENST00000520228 TSACCQ96A04 125 aaPredicted RBP6.65□□□□□ -1.34
SDCBP-208ENST00000520228 AP2M1Q96CW1 435 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms