RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PAK5Q9P286 719 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SAE1Q9UBE0 346 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 CTNNAL1Q9UBT7 734 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 PCYOX1Q9UHG3 505 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 BAIAP2L1Q9UHR4 511 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TEKT2Q9UIF3 430 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 UTS2RQ9UKP6 389 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 RIMKLBQ9ULI2 386 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TRIM33Q9UPN9 1127 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 ZNF148Q9UQR1 794 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC17A4Q9Y2C5 497 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 LRRC42Q9Y546 428 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 LIPGQ9Y5X9 500 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 DOCK4Q8N1I0 1966 aa2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 TET2Q6N021 2002 aaPredicted RBP2.88□□□□□ -1.95
SCARNA13-201ENST00000516672 NSG1A0A0A6YYJ2 146 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM187AA6NFU0 413 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 E7EQ34 232 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PDLIM1O00151 329 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PRPF4O43172 522 aaKnown RBP eCLIP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PRKNO60260 465 aaPredicted RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 CEP104O60308 925 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NME2P1O60361 137 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 KCNJ13O60928 360 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PRSS23O95084 383 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ZBTB11O95625 1053 aaPredicted RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 CRTAMO95727 393 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 AP2A1O95782 977 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 GAS8O95995 478 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 AGTP01019 485 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 AVPP01185 164 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 HLA-DQB2P05538 268 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 MSL3P1P0C860 447 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 TPBGLP0DKB5 382 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 COX6A1P12074 109 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 MLNP12872 115 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 F3P13726 295 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ACPPP15309 386 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ATP6V1C1P21283 382 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NME2P22392 152 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 APEX1P27695 318 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 AOAHP28039 575 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 RBL1P28749 1068 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 FOXN2P32314 431 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 CD68P34810 354 aaPredicted RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ADRA1AP35348 466 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 GCKP35557 465 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 RPL4P36578 427 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 CD86P42081 329 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NSG1P42857 185 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 RPL21P46778 160 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NPY2RP49146 381 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 VEGFCP49767 419 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 STC1P52823 247 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 DRG2P55039 364 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 EIF3BP55884 814 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 WNT3AP56704 352 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PROK1P58294 105 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 SARNPP82979 210 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ROR2Q01974 943 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 DSC2Q02487 901 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ITKQ08881 620 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ILF2Q12905 390 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 TRAF2Q12933 501 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 MSLNQ13421 630 aaPredicted RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 LRP8Q14114 963 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 FASTKQ14296 549 aaKnown RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 TAF1AQ15573 450 aaPredicted RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC9A3R2Q15599 337 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC1A5Q15758 541 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NKG7Q16617 165 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PGGHGQ32M88 737 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 GPR33Q49SQ1 333 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PYCR3Q53H96 274 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 BEX5Q5H9J7 111 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 THEMIS2Q5TEJ8 643 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 AP1ARQ63HQ0 302 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ADNP2Q6IQ32 1131 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 RHBDD2Q6NTF9 364 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PNCKQ6P2M8 343 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 TTC27Q6P3X3 843 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 CRTC3Q6UUV7 619 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 KDELC1Q6UW63 502 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NHLRC1Q6VVB1 395 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 LIPIQ6XZB0 460 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 SHISA6Q6ZSJ9 500 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ARHGEF18Q6ZSZ5 1173 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 DOK3Q7L591 496 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 NDUFAF7Q7L592 441 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ZNF550Q7Z398 422 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PCGF5Q86SE9 256 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 TBC1D1Q86TI0 1168 aaPredicted RBP2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 HOOK3Q86VS8 718 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ZNF567Q8N184 647 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 KIF2BQ8N4N8 673 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 FITM2Q8N6M3 262 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 ANKS4BQ8N8V4 417 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 PRELID2Q8N945 189 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 CCDC89Q8N998 374 aa2.87□□□□□ -1.95
SCARNA13-201ENST00000516672 FAM71DQ8N9W8 422 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms