RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 SLC2A12Q8TD20 617 aa14.54□□□□□ -0.08
LMNA-223ENST00000515459 ANKRD7Q92527 254 aa14.54□□□□□ -0.08
LMNA-223ENST00000515459 PITHD1Q9GZP4 211 aaPredicted RBP14.54□□□□□ -0.08
LMNA-223ENST00000515459 NT5DC2Q9H857 520 aa14.54□□□□□ -0.08
LMNA-223ENST00000515459 DMRT3Q9NQL9 472 aa14.54□□□□□ -0.08
LMNA-223ENST00000515459 COPS7AQ9UBW8 275 aa14.54□□□□□ -0.08
LMNA-223ENST00000515459 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 NPEPPSL1A6NEC2 478 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 GOLGA6L6A8MZA4 724 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 CDC7O00311 574 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 BANF1O75531 89 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 TBX6O95947 436 aaPredicted RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 RAF1P04049 648 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 BMP5P22003 454 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 PIGAP37287 484 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 GDF5P43026 501 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 LTBQ06643 244 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 TBL3Q12788 808 aaKnown RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 ASPHQ12797 758 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 MPEG1Q2M385 716 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 RNASEH2BQ5TBB1 312 aaKnown RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 SLC22A10Q63ZE4 541 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 ABHD17CQ6PCB6 329 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 ULK2Q8IYT8 1036 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 RNASE6Q93091 150 aaKnown RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 KIAA1191Q96A73 305 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 ZNF703Q9H7S9 590 aaPredicted RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 FOXD3Q9UJU5 478 aaPredicted RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 CBLCQ9ULV8 474 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 BOKQ9UMX3 212 aaPredicted RBP14.53□□□□□ -0.08
LMNA-223ENST00000515459 OARD1Q9Y530 152 aa14.53□□□□□ -0.08
LMNA-223ENST00000515459 HRNRQ86YZ3 2850 aaPredicted RBP14.52□□□□□ -0.08
LMNA-223ENST00000515459 LDB3O75112 727 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 RFPL3SP0C7P2 107 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 SLC6A12P48065 614 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 KCNJ2P63252 427 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 TGM3Q08188 693 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 DAZAP2Q15038 168 aaPredicted RBP14.52□□□□□ -0.09
LMNA-223ENST00000515459 DEFB113Q30KQ7 82 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 C18orf21Q32NC0 220 aaPredicted RBP14.52□□□□□ -0.09
LMNA-223ENST00000515459 FBXL19-AS1Q494R0 122 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 PIGGQ5H8A4 983 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 FBXW10Q5XX13 1052 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 SEM1Q6ZVN7 128 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 FRA10AC1Q70Z53 315 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 VN1R5Q7Z5H4 357 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 NKAPQ8N5F7 415 aaKnown RBP14.52□□□□□ -0.09
LMNA-223ENST00000515459 SLC22A8Q8TCC7 542 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 ZNF721Q8TF20 911 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 GRK7Q8WTQ7 553 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 RUNDC3BQ96NL0 473 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 CAPS2Q9BXY5 557 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 ZFP64Q9NPA5 681 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 ACKR4Q9NPB9 350 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 PRDM7Q9NQW5 492 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 QPCTLQ9NXS2 382 aa14.52□□□□□ -0.09
LMNA-223ENST00000515459 MTRF1LQ9UGC7 380 aaKnown RBP14.52□□□□□ -0.09
LMNA-223ENST00000515459 ATE1O95260 518 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 ETHE1O95571 254 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 COX7A2P14406 83 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 TACR1P25103 407 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 KCNC1P48547 511 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 KEAP1Q14145 624 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 ZNF791Q3KP31 576 aaPredicted RBP14.51□□□□□ -0.09
LMNA-223ENST00000515459 MSS51Q4VC12 460 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 PRAMEF20Q5VT98 475 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 ADGRD1Q6QNK2 874 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 MAATS1Q7Z4T9 603 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 ADAMTSL2Q86TH1 951 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 IGDCC3Q8IVU1 814 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 LIX1Q8N485 282 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 NAXEQ8NCW5 288 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 C7orf57Q8NEG2 295 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 WFDC11Q8NEX6 87 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 NEIL3Q8TAT5 605 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 NUBPLQ8TB37 319 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 PAQR8Q8TEZ7 354 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 RHBDF1Q96CC6 855 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 C18orf12Q96KH6 178 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 KCNC2Q96PR1 638 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 SLC6A15Q9H2J7 730 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 LYRM4Q9HD34 91 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 SH2D2AQ9NP31 389 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 GPRC5BQ9NZH0 403 aa14.51□□□□□ -0.09
LMNA-223ENST00000515459 MPDZO75970 2070 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 TUBAL3A6NHL2 446 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 AHRRA9YTQ3 701 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 EPPINO95925 133 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 CEACAM8P31997 349 aaPredicted RBP14.5□□□□□ -0.09
LMNA-223ENST00000515459 ID2Q02363 134 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 PPP1R7Q15435 360 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 TSNQ15631 228 aaKnown RBP14.5□□□□□ -0.09
LMNA-223ENST00000515459 ADNP2Q6IQ32 1131 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 Q71RC1 249 aaPredicted RBP14.5□□□□□ -0.09
LMNA-223ENST00000515459 LRRC25Q8N386 305 aaPredicted RBP14.5□□□□□ -0.09
LMNA-223ENST00000515459 SLC15A4Q8N697 577 aa14.5□□□□□ -0.09
LMNA-223ENST00000515459 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms