RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TEX51A0A1B0GUA7 166 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZAR1LA6NP61 321 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 YKT6O15498 198 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ICMTO60725 284 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ANGPTL1O95841 491 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PTHP01270 115 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CYP2A6P11509 494 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SDHBP21912 280 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ALAS2P22557 587 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 EEF1DP29692 281 aaKnown RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 IL12RB1P42701 662 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MTPNP58546 118 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 VEZF1Q14119 521 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PRPSAP1Q14558 356 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ANGPT1Q15389 498 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CEP78Q5JTW2 689 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CDKL4Q5MAI5 379 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TPRG1LQ5T0D9 272 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 C12orf73Q69YU5 71 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CREB3L2Q70SY1 520 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 WDR53Q7Z5U6 358 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TRIM69Q86WT6 500 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZDHHC13Q8IUH4 622 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 FAM20CQ8IXL6 584 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 CFAP52Q8N1V2 620 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 OXR1Q8N573 874 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 LPCAT1Q8NF37 534 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 GIMAP5Q96F15 307 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 HMCESQ96FZ2 354 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 APOL2Q9BQE5 337 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SARGQ9BW04 601 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ZDHHC5Q9C0B5 715 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 DUSP15Q9H1R2 295 aaPredicted RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 ACTR8Q9H981 624 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 SRA1Q9HD15 236 aaKnown RBP7.07□□□□□ -1.28
CLIP1-205ENST00000514271 MID1IP1Q9NPA3 183 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 PRSS16Q9NQE7 514 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TRPS1Q9UHF7 1281 aa7.07□□□□□ -1.28
CLIP1-205ENST00000514271 TNRC6BQ9UPQ9 1833 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 EVPLLA8MZ36 301 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CRYZL1O95825 349 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 JCHAINP01591 159 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 MT-ND1P03886 318 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CSF3P09919 207 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 TFPIP10646 304 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 FPR1P21462 350 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 AGFG1P52594 562 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 GNG2P59768 71 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ARF5P84085 180 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NFYCQ13952 458 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 MAPK11Q15759 364 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ZIK1Q3SY52 487 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 GPAT3Q53EU6 434 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 LAYNQ6UX15 382 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NRARPQ7Z6K4 114 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NOXA1Q86UR1 476 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 DCBLD1Q8N8Z6 715 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NLGN4YQ8NFZ3 816 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SIPA1Q96FS4 1042 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 MYO19Q96H55 970 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 KLHL15Q96M94 604 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 PRR14Q9BWN1 585 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RACGAP1Q9H0H5 632 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 EPS8L2Q9H6S3 715 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 MPP6Q9NZW5 540 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 TXNDC16Q9P2K2 825 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SNX6Q9UNH7 406 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 AURKCQ9UQB9 309 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 PPIL1Q9Y3C6 166 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 KCTD3Q9Y597 815 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 FAM221AA4D161 298 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NOTOA8MTQ0 251 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 C10orf142B7Z368 130 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 LOC110117498-PIK3R3F6TDL0 507 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 hCG_2039718K7EN88 272 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ANGPT2O15123 496 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RPP40O75818 363 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 IL6P05231 212 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 EPHX1P07099 455 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 CD36P16671 472 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 P2RY2P41231 377 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RHOAP61586 193 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RPS14P62263 151 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SNRPGP62308 76 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RHAGQ02094 409 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NPRL3Q12980 569 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ZMAT1Q5H9K5 638 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 C9orf64Q5T6V5 341 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 ZNF367Q7RTV3 350 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 EFL1Q7Z2Z2 1120 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NRSN1Q8IZ57 195 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 TP53I13Q8NBR0 393 aaPredicted RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 GALNT11Q8NCW6 608 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 PIK3R3Q92569 461 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 HGDQ93099 445 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 TBATAQ96M53 351 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 RNF145Q96MT1 663 aa7.06□□□□□ -1.28
CLIP1-205ENST00000514271 NUDT16L1Q9BRJ7 211 aaKnown RBP7.06□□□□□ -1.28
CLIP1-205ENST00000514271 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms