RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 MYO1HQ8N1T3 1032 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 GPATCH11Q8N954 259 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 SLC2A12Q8TD20 617 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 NTNG2Q96CW9 530 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 FAR2Q96K12 515 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 HIST1H2AHQ96KK5 128 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 TSNARE1Q96NA8 513 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 HIST1H2AJQ99878 128 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 AIF1LQ9BQI0 150 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 H2AFJQ9BTM1 129 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 RBM24Q9BX46 236 aaKnown RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 ARL15Q9NXU5 204 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 GALNT8Q9NY28 637 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 VTI1BQ9UEU0 232 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 EIF3LQ9Y262 564 aaKnown RBP10.05□□□□□ -0.8
DDX41-216ENST00000513562 SCN3AQ9NY46 2000 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 DNAJC13O75165 2243 aa10.05□□□□□ -0.8
DDX41-216ENST00000513562 A0A0G2JN53 185 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 ZCWPW2A0A1B0GU75 182 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 C17orf105B2RV13 164 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 B3GALT2O43825 422 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 CTNSO60931 367 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 IPO7O95373 1038 aaKnown RBP10.04□□□□□ -0.8
DDX41-216ENST00000513562 SAT1P21673 171 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 HNRNPH1P31943 449 aaKnown RBP10.04□□□□□ -0.8
DDX41-216ENST00000513562 KRTAP1-1Q07627 177 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 ASPHQ12797 758 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 RBBP5Q15291 538 aaKnown RBP10.04□□□□□ -0.8
DDX41-216ENST00000513562 UGT3A1Q6NUS8 523 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 NXPE4Q6UWF7 544 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 TMPRSS11BQ86T26 416 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDX41-216ENST00000513562 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 NUBPLQ8TB37 319 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 SLC22A8Q8TCC7 542 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 ZNF669Q96BR6 464 aaPredicted RBP10.04□□□□□ -0.8
DDX41-216ENST00000513562 FBXL8Q96CD0 374 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 MS4A6EQ96DS6 147 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 SPACA9Q96E40 222 aaPredicted RBP10.04□□□□□ -0.8
DDX41-216ENST00000513562 LINGO1Q96FE5 620 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 PERPQ96FX8 193 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 QRFPRQ96P65 431 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 CSF3RQ99062 836 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 CCL19Q99731 98 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 ALOXE3Q9BYJ1 711 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 TESMINQ9Y4I5 508 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 NPFFR2Q9Y5X5 522 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 CHCHD2Q9Y6H1 151 aaPredicted RBP10.04□□□□□ -0.8
DDX41-216ENST00000513562 TLN2Q9Y4G6 2542 aa10.04□□□□□ -0.8
DDX41-216ENST00000513562 A0A088AWK7 358 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 MYOCOSA0A1B0GUC4 107 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 LRIT2A6NDA9 550 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 PABPN1LA6NDY0 278 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 CASKO14936 926 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 ERI3O43414 337 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 ERN1O75460 977 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 HAUS5O94927 633 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 ETHE1O95571 254 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CNOT4O95628 575 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 FPR1P21462 350 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 ZNF10P21506 573 aaPredicted RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 GDF1P27539 372 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 LIM2P55344 173 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 EFTUD2Q15029 972 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDX41-216ENST00000513562 ACKR1Q16570 336 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CCNG2Q16589 344 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 NHSL2Q5HYW2 709 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 SEL1L2Q5TEA6 688 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 VASNQ6EMK4 673 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CASC4Q6P4E1 433 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 DRICH1Q6PGQ1 229 aaPredicted RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 PAQR3Q6TCH7 311 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CAND1Q86VP6 1230 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 LMNTD2Q8IXW0 634 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 KLHDC8AQ8IYD2 350 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 DND1Q8IYX4 353 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 SLC15A4Q8N697 577 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 C9orf106Q8NAJ2 232 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 OR10G3Q8NGC4 313 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 ZNF721Q8TF20 911 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 ATL1Q8WXF7 558 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 JSRP1Q96MG2 331 aaPredicted RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 TRIB1Q96RU8 372 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 SECISBP2Q96T21 854 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 NDNQ99608 321 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 DOHHQ9BU89 302 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 GSX2Q9BZM3 304 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CALHM2Q9HA72 323 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CNIH4Q9P003 139 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 COPS7AQ9UBW8 275 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 FBXO5Q9UKT4 447 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CNOT11Q9UKZ1 510 aaKnown RBP10.03□□□□□ -0.8
DDX41-216ENST00000513562 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 CAMK2AQ9UQM7 478 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 DYRK1BQ9Y463 629 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 IKBKGQ9Y6K9 419 aa10.03□□□□□ -0.8
DDX41-216ENST00000513562 ANK2Q01484 3957 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms