RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SNTB2Q13425 540 aaKnown RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 GINS1Q14691 196 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF789Q5FWF6 425 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SLC25A25Q6KCM7 469 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 CREB3L2Q70SY1 520 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SLC2A13Q96QE2 648 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 MCCC1Q96RQ3 725 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ARL6Q9H0F7 186 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 DPEP2Q9H4A9 486 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 XKR8Q9H6D3 395 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 NLE1Q9NVX2 485 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ABCD2Q9UBJ2 740 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ZFR2Q9UPR6 939 aaKnown RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 BEST1O76090 585 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 IFNA6P05013 189 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 HAPLN1P10915 354 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 CYBAP13498 195 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 HK1P19367 917 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SCAPQ12770 1279 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 GTDC1Q4AE62 458 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 AGMOQ6ZNB7 445 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF280BQ86YH2 543 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SLC43A3Q8NBI5 491 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 OR5AK3PQ8NH89 298 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 TMEM40Q8WWA1 233 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 POLMQ9NP87 494 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 AKIP1Q9NQ31 210 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 TDP1Q9NUW8 608 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 PCDHGB1Q9Y5G3 927 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 CNMDO75829 334 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SOD2P04179 222 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 GDI1P31150 447 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 HTR6P50406 440 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 GATMP50440 423 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ARSDP51689 593 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 PLAG1Q6DJT9 500 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SMARCD3Q6STE5 483 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ZNF782Q6ZMW2 699 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 NPWQ8N729 165 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 OR8K5Q8NH50 307 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ADAMTS15Q8TE58 950 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 PMEPA1Q969W9 287 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ISL2Q96A47 359 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 OR4K3Q96R72 315 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 CYP2S1Q96SQ9 504 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 TLR9Q9NR96 1032 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SARDHQ9UL12 918 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ASB4Q9Y574 426 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 INSL5Q9Y5Q6 135 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 DNAJC25-GNG10A0A024R161 153 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 GALTP07902 379 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 RORAP35398 523 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ACVRL1P37023 503 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 BTN1A1Q13410 526 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 HSF5Q4G112 596 aaPredicted RBP10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SPIN4Q56A73 249 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 MORN1Q5T089 497 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 NOXRED1Q6NXP6 359 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 CNIH2Q6PI25 160 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 CMTM8Q8IZV2 173 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ATP6V1C2Q8NEY4 427 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 MTG2Q9H4K7 406 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 ZDHHC4Q9NPG8 344 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 SLC35C2Q9NQQ7 365 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 TAS2R10Q9NYW0 307 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 TJP1Q07157 1748 aa10.8□□□□□ -0.68
TCOF1-211ENST00000513346 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 SLC16A6O15403 523 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 NUPL2O15504 423 aaKnown RBP10.79□□□□□ -0.68
TCOF1-211ENST00000513346 CAPNS1P04632 268 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 ERVPABLB-1P60509 514 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 EIF5AP63241 154 aaKnown RBP10.79□□□□□ -0.68
TCOF1-211ENST00000513346 RBBP4Q09028 425 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 UBXN2BQ14CS0 331 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 RANBP10Q6VN20 620 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 FRRS1Q6ZNA5 592 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 GALNT10Q86SR1 603 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 FUNDC1Q8IVP5 155 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 HDDC3Q8N4P3 179 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 SLC7A6Q92536 515 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 KLK6Q92876 244 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 NT5DC2Q9H857 520 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 SLAMF8Q9P0V8 285 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 SLC22A14Q9Y267 594 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 EIF3FO00303 357 aaPredicted RBP10.79□□□□□ -0.68
TCOF1-211ENST00000513346 HLA-DQA2P01906 255 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 EDN1P05305 212 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 CRISP3P54108 245 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 SLC3A1Q07837 685 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 GPR33Q49SQ1 333 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 GPR149Q86SP6 731 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 CNTN4Q8IWV2 1026 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 OR4C6Q8NH72 309 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 LCN9Q8WX39 176 aa10.79□□□□□ -0.68
TCOF1-211ENST00000513346 SLC35G5Q96KT7 338 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms