RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LMAN1P49257 510 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 HTR6P50406 440 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 RAB28P51157 221 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 NDUFA8P51970 172 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SUMO3P55854 103 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 LOXL3P58215 753 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 FMO1Q01740 532 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 FHL3Q13643 280 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 KRT33BQ14525 404 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SYCP1Q15431 976 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 C2CD6Q53TS8 623 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 TCTE1Q5JU00 501 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 LDLRAP1Q5SW96 308 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 C1orf189Q5VU69 101 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 HIBCHQ6NVY1 386 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 GJB7Q6PEY0 223 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SARM1Q6SZW1 724 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 C16orf47Q6ZP98 133 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 AMIGO1Q86WK6 493 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 TRAPPC5Q8IUR0 188 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SIAH3Q8IW03 269 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 CHERPQ8IWX8 916 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 DNAJC22Q8N4W6 341 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 POGLUT1Q8NBL1 392 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 GPR26Q8NDV2 337 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 OR2L2Q8NH16 312 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 JOSD2Q8TAC2 188 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM222BQ8WU58 562 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 LCN9Q8WX39 176 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 PIGTQ969N2 578 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 EID2BQ96D98 161 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 LRRC46Q96FV0 321 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SCMH1Q96GD3 660 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 LINC00615Q96LM1 132 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 C12orf66Q96MD2 445 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 PPM1MQ96MI6 270 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 CSPG4P5Q96PW8 444 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 OLFM1Q99784 485 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ARPC5LQ9BPX5 153 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 CRACR2AQ9BSW2 395 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 TUBB6Q9BUF5 446 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SELENOOQ9BVL4 669 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 UCK2Q9BZX2 261 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 THAP2Q9H0W7 228 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 HIPK2Q9H2X6 1198 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF160Q9HCG1 818 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 FAM60AQ9NP50 221 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ADAM22Q9P0K1 906 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 LRFN1Q9P244 771 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 XPR1Q9UBH6 696 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 TRIM10Q9UDY6 481 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 TAGLN3Q9UI15 199 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 HOOK1Q9UJC3 728 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 NPIPA1Q9UND3 350 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 PSMD13Q9UNM6 376 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 SNX13Q9Y5W8 968 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ALG6Q9Y672 507 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 HRNRQ86YZ3 2850 aaPredicted RBP3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 PKD1L1Q8TDX9 2849 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 ZANQ9Y493 2812 aa3.43□□□□□ -1.86
PDLIM5-218ENST00000513341 MPDZO75970 2070 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 IGLV3-12A0A075B6K2 115 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 LOC102723996A0A087X1L8 192 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 IGHV1-45A0A0A0MS14 117 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 H0YIZ8 118 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CLDN4O14493 209 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CCP110O43303 1012 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ALOX12BO75342 701 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 RNF8O76064 485 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 UQCRHP07919 91 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SP1P08047 785 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC35G4P0C7Q5 338 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 COX6A1P12074 109 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 UGT1A1P22309 533 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ATP5F1P24539 256 aaPredicted RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CCNCP24863 283 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SERPINB6P35237 376 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 HMGCLP35914 325 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 DLX5P56178 289 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 MAXP61244 160 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 DCAF7P61962 342 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 HOXA4Q00056 320 aaPredicted RBP3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CDR2Q01850 454 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 KLC1Q07866 573 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 PTP4A2Q12974 167 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 PNOCQ13519 176 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ITGA9Q13797 1035 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 NFE2L1Q14494 772 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC25A35Q3KQZ1 300 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ATP13A5Q4VNC0 1218 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 BOLA3Q53S33 107 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 NAA35Q5VZE5 725 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 SLC25A25Q6KCM7 469 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 CCDC70Q6NSX1 233 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 PPP1R2P3Q6NXS1 205 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ARHGAP11AQ6P4F7 1023 aa3.42□□□□□ -1.86
PDLIM5-218ENST00000513341 ZNF449Q6P9G9 518 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms