RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 CHERPQ8IWX8 916 aaKnown RBP12.55□□□□□ -0.4
CLDND1-224ENST00000511667 RNF175Q8N4F7 328 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 FAM47BQ8NA70 645 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 MORN4Q8NDC4 146 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 OR8K3Q8NH51 312 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 THAP3Q8WTV1 239 aaPredicted RBP12.55□□□□□ -0.4
CLDND1-224ENST00000511667 MZB1Q8WU39 189 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 VMP1Q96GC9 406 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 FRMD6Q96NE9 622 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 MRPL57Q9BQC6 102 aaKnown RBP12.55□□□□□ -0.4
CLDND1-224ENST00000511667 HES7Q9BYE0 225 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 OR51B5Q9H339 312 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 DDX31Q9H8H2 851 aaKnown RBP12.55□□□□□ -0.4
CLDND1-224ENST00000511667 IPPKQ9H8X2 491 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 L2HGDHQ9H9P8 463 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 NFU1Q9UMS0 254 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 ASB4Q9Y574 426 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
CLDND1-224ENST00000511667 A0A0A6YYD5 115 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 TRIM49D1C9J1S8 452 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 LRRTM2O43300 516 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 PRKNO60260 465 aaPredicted RBP12.54□□□□□ -0.4
CLDND1-224ENST00000511667 ABCB7O75027 752 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 SP1P08047 785 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 GFAPP14136 432 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 PTX3P26022 381 aaPredicted RBP12.54□□□□□ -0.4
CLDND1-224ENST00000511667 CLCN2P51788 898 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 SERTAD2Q14140 314 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 UAP1Q16222 522 aaPredicted RBP12.54□□□□□ -0.4
CLDND1-224ENST00000511667 C10orf62Q5T681 223 aaPredicted RBP12.54□□□□□ -0.4
CLDND1-224ENST00000511667 SLC25A25Q6KCM7 469 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 LCA5Q86VQ0 697 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 CYP4X1Q8N118 509 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 PTGR2Q8N8N7 351 aaPredicted RBP12.54□□□□□ -0.4
CLDND1-224ENST00000511667 C7orf57Q8NEG2 295 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 OR52B6Q8NGF0 335 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 SUN3Q8TAQ9 357 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 RGMAQ96B86 450 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 VPS11Q9H270 941 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 MRPL46Q9H2W6 279 aaKnown RBP12.54□□□□□ -0.4
CLDND1-224ENST00000511667 MS4A12Q9NXJ0 267 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 ZNF835Q9Y2P0 537 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 RNF11Q9Y3C5 154 aa12.54□□□□□ -0.4
CLDND1-224ENST00000511667 NCOA6Q14686 2063 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 PROM1O43490 865 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ZG16O60844 167 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 SEMA3DO95025 777 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 SNRPAP09012 282 aaKnown RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 CYB561P49447 251 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 RPS13P62277 151 aaKnown RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 PMP22Q01453 160 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 SLC13A2Q13183 592 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 BIKQ13323 160 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 AP5B1Q2VPB7 878 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 RNFT1Q5M7Z0 435 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 Q6ZPB1 254 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 TAOK1Q7L7X3 1001 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 CNPY4Q8N129 248 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 TMEM132CQ8N3T6 1108 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 HORMAD2Q8N7B1 307 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 TMEM178AQ8NBL3 297 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 MYRIPQ8NFW9 859 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 OR14A16Q8NHC5 309 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ZNF483Q8TF39 744 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 NCLNQ969V3 563 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 NSUN5Q96P11 429 aaKnown RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 SORBS1Q9BX66 1292 aaKnown RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ALOXE3Q9BYJ1 711 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ACTR8Q9H981 624 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 CPSF2Q9P2I0 782 aaKnown RBP12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ZNF225Q9UK10 706 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 ATG4BQ9Y4P1 393 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
CLDND1-224ENST00000511667 TRBV11-1A0A0K0K1C0 115 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 A8MUA0 341 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 POC1B-GALNT4F8VUJ3 575 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 TMPRSS11DO60235 418 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 FGF17O60258 216 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 EEDO75530 441 aaKnown RBP12.52□□□□□ -0.41
CLDND1-224ENST00000511667 SLC25A12O75746 678 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 ZFAND5O76080 213 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 CLDN9O95484 217 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 PCNAP12004 261 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 CD46P15529 392 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.41
CLDND1-224ENST00000511667 SSR2P43308 183 aa12.52□□□□□ -0.41
CLDND1-224ENST00000511667 HNRNPH2P55795 449 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms