RNA–Protein interactions for RNA: ENST00000511207.5

CCNH-209, Transcript of cyclin H, human

TSL 2

Gene CCNH, Length 451 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-209	ENST00000511207	RIG	Q13278	110 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	EXOSC7	Q15024	291 aa	Known RBP	3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	CEBPE	Q15744	281 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	ZSWIM7	Q19AV6	140 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	GPAT3	Q53EU6	434 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	RIPPLY2	Q5TAB7	128 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	AFTPH	Q6ULP2	937 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	FIP1L1	Q6UN15	594 aa	Known RBP	3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	ARSK	Q6UWY0	536 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	ISLR2	Q6UXK2	745 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	ADGRD2	Q7Z7M1	963 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	VPS36	Q86VN1	386 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	SLC22A16	Q86VW1	577 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	DCUN1D3	Q8IWE4	304 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	HSCB	Q8IWL3	235 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	LRRC17	Q8N6Y2	441 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	CCDC197	Q8NCU1	140 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	OR5M9	Q8NGP3	310 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	CHPT1	Q8WUD6	406 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	NCLN	Q969V3	563 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	ZNF274	Q96GC6	653 aa	Predicted RBP	3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	KRT12	Q99456	494 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	EPYC	Q99645	322 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	GPA33	Q99795	319 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	FUNDC2	Q9BWH2	189 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	NACA2	Q9H009	215 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	WWP1	Q9H0M0	922 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	DPH5	Q9H2P9	285 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	RWDD1	Q9H446	243 aa	Predicted RBP	3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	FAM124B	Q9H5Z6	455 aa	Predicted RBP	3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	SLC52A3	Q9NQ40	469 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	CLIP2	Q9UDT6	1046 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	WDR37	Q9Y2I8	494 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	ZMYM6	O95789	1325 aa		3.12	□□□□□ -1.91
CCNH-209	ENST00000511207	CUX2	O14529	1486 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	SCN5A	Q14524	2016 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207		A0A087WZY1	265 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	TMEM89	A2RUT3	159 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GRID2	O43424	1007 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	AKR7A3	O95154	331 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	IGLV2-11	P01706	119 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	KRT8	P05787	483 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	HMBS	P08397	361 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	CD48	P09326	243 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GNS	P15586	552 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GNB3	P16520	340 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GPX3	P22352	226 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GPR183	P32249	361 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	MAGEA4	P43358	317 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	TSFM	P43897	325 aa	Known RBP	3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	LIMK2	P53671	638 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	XG	P55808	180 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	BACE1	P56817	501 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	MYBPC1	Q00872	1141 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	NME3	Q13232	169 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	RFTN2	Q52LD8	501 aa	Predicted RBP	3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	STPG1	Q5TH74	334 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	CES4A	Q5XG92	561 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	ARHGAP17	Q68EM7	881 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	RTL6	Q6ICC9	239 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GALNT17	Q6IS24	598 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	CDC42EP5	Q6NZY7	148 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	CHMP1B	Q7LBR1	199 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	HOGA1	Q86XE5	327 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	RAB42	Q8N4Z0	105 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	CERS5	Q8N5B7	392 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	GVQW1	Q8N7I0	195 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	OR52B4	Q8NGK2	314 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	OR6S1	Q8NH40	331 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	MRGPRD	Q8TDS7	321 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	SMAP2	Q8WU79	429 aa	Predicted RBP	3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	TCP11	Q8WWU5	503 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	TMEM45B	Q96B21	275 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	C16orf58	Q96GQ5	468 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	FAM218A	Q96MZ4	157 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	CTAGE1	Q96RT6	745 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	RAB40C	Q96S21	281 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	OVOL2	Q9BRP0	275 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	DCTN5	Q9BTE1	182 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	WRAP53	Q9BUR4	548 aa	Known RBP	3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	FICD	Q9BVA6	458 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	PINK1	Q9BXM7	581 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	MED17	Q9NVC6	651 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	IL20RA	Q9UHF4	553 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	ZNF490	Q9ULM2	529 aa	Predicted RBP	3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	DIMT1	Q9UNQ2	313 aa	Known RBP	3.11	□□□□□ -1.91
CCNH-209	ENST00000511207	MGAT4B	Q9UQ53	548 aa		3.11	□□□□□ -1.91
CCNH-209	ENST00000511207		A0A1W2PR80	420 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	SHISA7	A6NL88	538 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	BUB1	O43683	1085 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	KIAA0513	O60268	411 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	TSPAN2	O60636	221 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	LRCH4	O75427	683 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	DIRAS3	O95661	229 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	AK1	P00568	194 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	IFNB1	P01574	187 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	PROS1	P07225	676 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	PRDX6	P30041	224 aa		3.1	□□□□□ -1.91
CCNH-209	ENST00000511207	CHRNB4	P30926	498 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms