RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ART3Q13508 389 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 GTF2H2Q13888 395 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 PSMD6Q15008 389 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 TAF11Q15544 211 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 ALG11Q2TAA5 492 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 C14orf28Q4W4Y0 310 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 NKAIN2Q5VXU1 208 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 BSPRYQ5W0U4 402 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 GTF2H2CQ6P1K8 395 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 PIGZQ86VD9 579 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 GKN2Q86XP6 184 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 ZBTB2Q8N680 514 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 OR2A12Q8NGT7 310 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 MTERF1Q99551 399 aaKnown RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 SLC25A23Q9BV35 468 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 UBXN6Q9BZV1 441 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 TKTL2Q9H0I9 626 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 PPP1R3EQ9H7J1 279 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 APMAPQ9HDC9 416 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 MBNL1Q9NR56 388 aaKnown RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 IL1RAPL1Q9NZN1 696 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 TMEM9Q9P0T7 183 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 RCOR3Q9P2K3 495 aaPredicted RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 COPG2Q9UBF2 871 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 NOL7Q9UMY1 257 aaKnown RBP5.84□□□□□ -1.47
USP53-206ENST00000510737 RPS6KL1Q9Y6S9 549 aa5.84□□□□□ -1.47
USP53-206ENST00000510737 YJEFN3A6XGL0 299 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 E7ENQ6 273 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 STX6O43752 255 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 WDR1O75083 606 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 THRAP10827 490 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 BDKRB2P30411 391 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 HOXD13P35453 343 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 CASP4P49662 377 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 TKTL1P51854 596 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 PDE1BQ01064 536 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 SULT2A1Q06520 285 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 TRA2AQ13595 282 aaKnown RBP eCLIP5.83□□□□□ -1.48
USP53-206ENST00000510737 ANKRD1Q15327 319 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 SNRNP35Q16560 246 aaKnown RBP5.83□□□□□ -1.48
USP53-206ENST00000510737 ZNF699Q32M78 642 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 MACC1Q6ZN28 852 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 ADGRG6Q86SQ4 1221 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 UNC45BQ8IWX7 931 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 SPATA6LQ8N4H0 392 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 CCDC112Q8NEF3 446 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 OR52K2Q8NGK3 314 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 RNF139Q8WU17 664 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 PNPLA2Q96AD5 504 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 DNAJC19Q96DA6 116 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 HDAC11Q96DB2 347 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 ST6GAL2Q96JF0 529 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 BBS4Q96RK4 519 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 ULBP1Q9BZM6 244 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 OLA1Q9NTK5 396 aaKnown RBP5.83□□□□□ -1.48
USP53-206ENST00000510737 XPO7Q9UIA9 1087 aaKnown RBP5.83□□□□□ -1.48
USP53-206ENST00000510737 NTNG1Q9Y2I2 539 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 KLF2Q9Y5W3 355 aaPredicted RBP5.83□□□□□ -1.48
USP53-206ENST00000510737 UNC13CQ8NB66 2214 aa5.83□□□□□ -1.48
USP53-206ENST00000510737 MAP1AP78559 2803 aaPredicted RBP5.83□□□□□ -1.48
USP53-206ENST00000510737 ATRQ13535 2644 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 K7ERQ8 282 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 INPP4BO15327 924 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 LRCH4O75427 683 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 CREG1O75629 220 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 ADRB3P13945 408 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 COX6B1P14854 86 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 SRP54P61011 504 aaKnown RBP5.82□□□□□ -1.48
USP53-206ENST00000510737 CYP24A1Q07973 514 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 SLC12A1Q13621 1099 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 CLPPQ16740 277 aaPredicted RBP5.82□□□□□ -1.48
USP53-206ENST00000510737 CCNYL2Q5T2Q4 361 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 SPOPLQ6IQ16 392 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 KCTD18Q6PI47 426 aaPredicted RBP5.82□□□□□ -1.48
USP53-206ENST00000510737 ENPP7Q6UWV6 458 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 C17orf82Q86X59 251 aaPredicted RBP5.82□□□□□ -1.48
USP53-206ENST00000510737 TDRPQ86YL5 185 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 TRIM58Q8NG06 486 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 OR4D9Q8NGE8 314 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 CALML4Q96GE6 196 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 C8orf76Q96K31 380 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 FEM1AQ9BSK4 669 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 DYRK4Q9NR20 520 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 FBXO8Q9NRD0 319 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 FAM118AQ9NWS6 357 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 PDP2Q9P2J9 529 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 HSPB7Q9UBY9 170 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 OR51B4Q9Y5P0 310 aa5.82□□□□□ -1.48
USP53-206ENST00000510737 NYNRINQ9P2P1 1898 aaKnown RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 A6NCN8 305 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 BLOC1S5-TXNDC5H3BN57 136 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 TGFB1I1O43294 461 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 DPM1O60762 260 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 ZNF821O75541 412 aaPredicted RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 CEACAM4O75871 244 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 MT-CYBP00156 380 aaPredicted RBP5.81□□□□□ -1.48
USP53-206ENST00000510737 F9P00740 461 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 INHBAP08476 426 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 GAP43P17677 238 aa5.81□□□□□ -1.48
USP53-206ENST00000510737 KLK2P20151 261 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms