RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 PNO1Q9NRX1 252 aaKnown RBP16.97■□□□□ 0.31
CLDND1-220ENST00000508902 GRID1Q9ULK0 1009 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 PTPN13Q12923 2485 aa16.97■□□□□ 0.31
CLDND1-220ENST00000508902 GLOD5A6NK44 160 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 TMEM200CA6NKL6 621 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 A8MUI8 341 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 TYROBPO43914 113 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 DDAH2O95865 285 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 FAM58BPP0C7Q3 252 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 ICAM2P13598 275 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 CPA3P15088 417 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 UQCRFS1P47985 274 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 TNFSF10P50591 281 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 IFFO1Q0D2I5 559 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 TNFAIP8L3Q5GJ75 292 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 ACER2Q5QJU3 275 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 IRAK1BP1Q5VVH5 260 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 CES4AQ5XG92 561 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 TTC19Q6DKK2 380 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-220ENST00000508902 SCIMPQ6UWF3 145 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 COMMD6Q7Z4G1 85 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 GPR180Q86V85 440 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 CCNYL1Q8N7R7 359 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 DOK4Q8TEW6 326 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 SELENOMQ8WWX9 145 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 SNRNP40Q96DI7 357 aaKnown RBP16.96■□□□□ 0.31
CLDND1-220ENST00000508902 CNDP1Q96KN2 507 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 ZIM3Q96PE6 472 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 GATA5Q9BWX5 397 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-220ENST00000508902 SLC29A3Q9BZD2 475 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 ELOVL6Q9H5J4 265 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 EPS8L2Q9H6S3 715 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 SLC12A4Q9UP95 1085 aa16.96■□□□□ 0.31
CLDND1-220ENST00000508902 TTLL8A6PVC2 850 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 HRKO00198 91 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 PGRMC2O15173 223 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 WISP1O95388 367 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ZIC2O95409 532 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ESRRBO95718 433 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 KLK1P06870 262 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 CCT5P48643 541 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 RAE1P78406 368 aaKnown RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 PHEXP78562 749 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 FOLH1Q04609 750 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ZNF33BQ06732 778 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 TERF2Q15554 542 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 C16orf47Q6ZP98 133 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ZNF227Q86WZ6 799 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 NUDT13Q86X67 352 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 CNPY4Q8N129 248 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ARMC10Q8N2F6 343 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 CISD2Q8N5K1 135 aaKnown RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 B3GNT7Q8NFL0 401 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 DNAJB14Q8TBM8 379 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 RDH11Q8TC12 318 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 CPT1CQ8TCG5 803 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 HAS2Q92819 552 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 NCLNQ969V3 563 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 FAM111AQ96PZ2 611 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 BARD1Q99728 777 aaKnown RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 HES7Q9BYE0 225 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ALOXE3Q9BYJ1 711 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 SHCBP1LQ9BZQ2 653 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 RNF32Q9H0A6 362 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 PRM3Q9NNZ6 103 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 MID1IP1Q9NPA3 183 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ADAP2Q9NPF8 381 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ASF1BQ9NVP2 202 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 VTI1BQ9UEU0 232 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 MRPS33Q9Y291 106 aaKnown RBP16.95■□□□□ 0.3
CLDND1-220ENST00000508902 POLEQ07864 2286 aa16.95■□□□□ 0.3
CLDND1-220ENST00000508902 ASH1LQ9NR48 2969 aaKnown RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 CLDN4O14493 209 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 KLHL41O60662 606 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 MLYCDO95822 493 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 SERPINB3P29508 390 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 ALDH3A1P30838 453 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 ETV4P43268 484 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 PKNOX1P55347 436 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 HMGCS1Q01581 520 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 SRSF11Q05519 484 aaKnown RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 SRSF1Q07955 248 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 ZNF169Q14929 603 aaPredicted RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 ELAVL1Q15717 326 aaKnown RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 C10orf62Q5T681 223 aaPredicted RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 LIPMQ5VYY2 423 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 METTL6Q8TCB7 284 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 TCP10LQ8TDR4 215 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 SREK1Q8WXA9 508 aaKnown RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 TM9SF4Q92544 642 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 APIPQ96GX9 242 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 SIGLEC12Q96PQ1 595 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 TAAR6Q96RI8 345 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 ILKAPQ9H0C8 392 aaPredicted RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 RPF2Q9H7B2 306 aaKnown RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 BRF2Q9HAW0 419 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 LYARQ9NX58 379 aaKnown RBP16.94■□□□□ 0.3
CLDND1-220ENST00000508902 ANKRD10Q9NXR5 420 aa16.94■□□□□ 0.3
CLDND1-220ENST00000508902 SNX6Q9UNH7 406 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms