RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ATP8B1O43520 1251 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TMPRSS11DO60235 418 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PCDH7O60245 1069 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 EEDO75530 441 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 CEACAM4O75871 244 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 SERPINA7P05543 415 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 CHRNGP07510 517 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 DRD2P14416 443 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PCSK2P16519 638 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 MAOAP21397 527 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PRPH2P23942 346 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 MAPK1P28482 360 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 SLC1A6P48664 564 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 CCL11P51671 97 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 FOXA1P55317 472 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 FOXL2P58012 376 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 SNRPNP63162 240 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 EEF1A2Q05639 463 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 ZNF763Q0D2J5 394 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TBL3Q12788 808 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 MYBPC3Q14896 1274 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 NR6A1Q15406 480 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 ELAVL1Q15717 326 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 ATP6AP1LQ52LC2 224 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 LACTB2Q53H82 288 aaPredicted RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 SFT2D3Q587I9 215 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TCHHL1Q5QJ38 904 aaPredicted RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 NDUFAF5Q5TEU4 345 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 AGAP7PQ5VUJ5 663 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 CLEC6AQ6EIG7 209 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TCTN3Q6NUS6 607 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 GALNT18Q6P9A2 607 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PAPD4Q6PIY7 484 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 IKBIPQ70UQ0 350 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PARP9Q8IXQ6 854 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TMEM132CQ8N3T6 1108 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 OR6Y1Q8NGX8 325 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 OR14A16Q8NHC5 309 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 M1APQ8TC57 530 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TWIST2Q8WVJ9 160 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 C8orf44Q96CB5 159 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 RBM18Q96H35 190 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 ART5Q96L15 291 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PPP3R2Q96LZ3 170 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 AGAP4Q96P64 663 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 KCNA7Q96RP8 456 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 HBEGFQ99075 208 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 LRTM1Q9HBL6 345 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 ZNF160Q9HCG1 818 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 MED4Q9NPJ6 270 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 RYDENQ9NUL5 291 aaKnown RBP8.58□□□□□ -1.04
NUP54-207ENST00000508583 THAP1Q9NVV9 213 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 C1orf109Q9NX04 203 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 C5AR2Q9P296 337 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 ABI3Q9P2A4 366 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 FIS1Q9Y3D6 152 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 RAP2CQ9Y3L5 183 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 ASB4Q9Y574 426 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 DNAJC15Q9Y5T4 150 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 CLCA3PQ9Y6N3 262 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 MGAQ8IWI9 3026 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 CHD6Q8TD26 2715 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ATMQ13315 3056 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SAGE2PA6NJ88 616 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 FAM227AF5H4B4 570 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 KLF11O14901 512 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 OR10H2O60403 315 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 VPS4BO75351 444 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SEC22BO75396 215 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SEC24DO94855 1032 aaPredicted RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 AIFM1O95831 613 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 IFNA16P05015 189 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ANXA4P09525 319 aaPredicted RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 FAM87AP0C7U9 286 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 BGNP21810 368 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 PIK3R1P27986 724 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 TIA1P31483 386 aaKnown RBP eCLIP8.57□□□□□ -1.04
NUP54-207ENST00000508583 HTR6P50406 440 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 RPL14P50914 215 aaKnown RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 HK2P52789 917 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 HNRNPH2P55795 449 aaKnown RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 PPP2R2AP63151 447 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 HMGCS1Q01581 520 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 MAD2L1Q13257 205 aaPredicted RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 MPP2Q14168 576 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 PCOLCEQ15113 449 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 BTBD16Q32M84 506 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 CRB2Q5IJ48 1285 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 CPZQ66K79 652 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 LANCL3Q6ZV70 420 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 TMEM151BQ8IW70 566 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 LRRC34Q8IZ02 419 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ST13P4Q8IZP2 240 aaPredicted RBP8.57□□□□□ -1.04
NUP54-207ENST00000508583 FAM9CQ8IZT9 166 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 SLC5A8Q8N695 610 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 ARFGAP2Q8N6H7 521 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 AGR3Q8TD06 166 aa8.57□□□□□ -1.04
NUP54-207ENST00000508583 LRRC8CQ8TDW0 803 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms