RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RAB3IL1Q8TBN0 382 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 PAQR8Q8TEZ7 354 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 ZNF480Q8WV37 535 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 P3H4Q92791 437 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 NEUROG1Q92886 237 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 FBXW5Q969U6 566 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 ALKBH8Q96BT7 664 aaKnown RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 FAM136AQ96C01 138 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 LRRC45Q96CN5 670 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 RUNDC3BQ96NL0 473 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 GNRHR2Q96P88 292 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 ALG2Q9H553 416 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 PPIEQ9UNP9 301 aaKnown RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 PCDHGB1Q9Y5G3 927 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 LGALS16A8MUM7 142 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 ZNF487B1APH4 448 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 PRMT5O14744 637 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 NDUFS4O43181 175 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 NRDCO43847 1150 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 CEP104O60308 925 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 DLX3O60479 287 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 RGS9O75916 674 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 SLC16A8O95907 504 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 ERGP11308 486 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 SLC25A16P16260 332 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 CHRM3P20309 590 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 USF1P22415 310 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 HRH2P25021 359 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 RBL1P28749 1068 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 GRK3P35626 688 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 MASP1P48740 699 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 CDK9P50750 372 aaKnown RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 DSCR9P59020 149 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 RAB8AP61006 207 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 TBL3Q12788 808 aaKnown RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 TFDP2Q14188 446 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 CR1LQ2VPA4 569 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 ZNF791Q3KP31 576 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 FASTKD1Q53R41 847 aaKnown RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 E4F1Q66K89 784 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 MFSD7Q6UXD7 560 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 YRDCQ86U90 279 aaKnown RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 ZNF610Q8N9Z0 462 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 MFSD9Q8NBP5 474 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 OR10G3Q8NGC4 313 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 OR4L1Q8NH43 312 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 LILRB1Q8NHL6 650 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 ATL1Q8WXF7 558 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 HTRA1Q92743 480 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 MSI2Q96DH6 328 aaKnown RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 MRFAP1L1Q96HT8 127 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 ZNF597Q96LX8 424 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 PANX3Q96QZ0 392 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 ERGIC2Q96RQ1 377 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 TMEM204Q9BSN7 226 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 PRTFDC1Q9NRG1 225 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 CNIH4Q9P003 139 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 FEZ2Q9UHY8 353 aaPredicted RBP6.54□□□□□ -1.36
VCAN-207ENST00000507162 ANAPC5Q9UJX4 755 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 MMACHCQ9Y4U1 282 aa6.54□□□□□ -1.36
VCAN-207ENST00000507162 ELOA3DA6NLF2 546 aaPredicted RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 FAM157AC9JC47 383 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 MYO1CO00159 1063 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 OR1F1O43749 312 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 TGM6O95932 706 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 CATP04040 527 aaKnown RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 HPNP05981 417 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 CTNNA2P26232 953 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 GCKP35557 465 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 PCYT1AP49585 367 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 STARP49675 285 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 CCR8P51685 355 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 CCZ1BP86790 482 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 CCZ1P86791 482 aaPredicted RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 SEMA3AQ14563 771 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 ELOA3BQ3SY89 546 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 NHSL2Q5HYW2 709 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 NIPAL1Q6NVV3 410 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 CA13Q8N1Q1 262 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 SNX31Q8N9S9 440 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 MORN4Q8NDC4 146 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 ELOA3Q8NG57 546 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 ZFAND2BQ8WV99 257 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 FAM168AQ92567 244 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 DIO2Q92813 273 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 DAZLQ92904 295 aaKnown RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 C3orf49Q96BT1 292 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 PYCR2Q96C36 320 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 SPACA9Q96E40 222 aaPredicted RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 ZNF845Q96IR2 970 aaPredicted RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 ADAD1Q96M93 576 aaKnown RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 QKIQ96PU8 341 aaKnown RBP eCLIP6.53□□□□□ -1.36
VCAN-207ENST00000507162 PANX2Q96RD6 677 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 FAM129AQ9BZQ8 928 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 ARNT2Q9HBZ2 717 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 FAM114A2Q9NRY5 505 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 DNAJC11Q9NVH1 559 aa6.53□□□□□ -1.36
VCAN-207ENST00000507162 ZNHIT6Q9NWK9 470 aaKnown RBP6.53□□□□□ -1.36
VCAN-207ENST00000507162 SLC2A6Q9UGQ3 507 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms