RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 GPRIN2O60269 458 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 CSO75390 466 aaKnown RBP2.99□□□□□ -1.93
CHD1-203ENST00000505657 FRAT2O75474 233 aaPredicted RBP2.99□□□□□ -1.93
CHD1-203ENST00000505657 RAD51DO75771 328 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 FHP07954 510 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 NUDT17P0C025 328 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 GLRA1P23415 457 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 RPL9P32969 192 aaKnown RBP2.99□□□□□ -1.93
CHD1-203ENST00000505657 TNNT3P45378 269 aaPredicted RBP2.99□□□□□ -1.93
CHD1-203ENST00000505657 ADARP55265 1226 aaKnown RBP2.99□□□□□ -1.93
CHD1-203ENST00000505657 POU5F1Q01860 360 aaKnown RBP2.99□□□□□ -1.93
CHD1-203ENST00000505657 LCP2Q13094 533 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 SPHARQ15513 63 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 LRRC38Q5VT99 294 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 LINC00696Q6ZRV3 163 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 CCDC197Q8NCU1 140 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 TRPV3Q8NET8 790 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 FAM46BQ96A09 425 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 PCED1BQ96HM7 432 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 DESI2Q9BSY9 194 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 LRRC2Q9BYS8 371 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 CXXC4Q9H2H0 198 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 VIPAS39Q9H9C1 493 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 PRR34Q9NV39 138 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 ZNF446Q9NWS9 450 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 ADAMTS9Q9P2N4 1935 aa2.99□□□□□ -1.93
CHD1-203ENST00000505657 ACEP12821 1306 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 SH3PXD2BA1X283 911 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 NEDD8-MDP1E9PL57 170 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 CCER2I3L3R5 266 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 PHOX2AO14813 284 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 STX6O43752 255 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 MT-ND1P03886 318 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 OR9G9P0C7N8 305 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 GPX3P22352 226 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 RPL27P61353 136 aaKnown RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 ASIC1P78348 528 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 MFGE8Q08431 387 aaPredicted RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 SLC17A1Q14916 467 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 WSCD2Q2TBF2 565 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 KBTBD12Q3ZCT8 623 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 ZNF506Q5JVG8 444 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 DCAF12Q5T6F0 453 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 CCDC71Q8IV32 467 aaPredicted RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 LAX1Q8IWV1 398 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 CLYBLQ8N0X4 340 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 THEM5Q8N1Q8 247 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 GDAP1Q8TB36 358 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 PCNPQ8WW12 178 aaKnown RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 GGHQ92820 318 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 SSX3Q99909 188 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 NUSAP1Q9BXS6 441 aaKnown RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 MARCH7Q9H992 704 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 FAM120CQ9NX05 1096 aaKnown RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 MIS18AQ9NYP9 233 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 PLEK2Q9NYT0 353 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 TP53TG3Q9ULZ0 132 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 FBXO7Q9Y3I1 522 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 ZFP37Q9Y6Q3 630 aaPredicted RBP2.98□□□□□ -1.93
CHD1-203ENST00000505657 CROCCQ5TZA2 2017 aa2.98□□□□□ -1.93
CHD1-203ENST00000505657 A0A1W2PQ72 361 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 SMIM30A4D0T7 59 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 TMCO5BA8MYB1 307 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 PSMA7O14818 248 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 SH3BGRLO75368 114 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 CSDE1O75534 798 aaKnown RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 STBD1O95210 358 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 B4GALT1P15291 398 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 TCF7P36402 384 aaPredicted RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 SLC1A6P48664 564 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 NOVP48745 357 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 TNFSF10P50591 281 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 SLC34A1Q06495 639 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 FASTKQ14296 549 aaKnown RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 SLMAPQ14BN4 828 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 PCK2Q16822 640 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 NHLRC3Q5JS37 347 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 PRAMEF8Q5VWM4 474 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 SNRNP48Q6IEG0 339 aaKnown RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 RFWD3Q6PCD5 774 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 CYP4V2Q6ZWL3 525 aaPredicted RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 MARCH9Q86YJ5 346 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 ZNF781Q8N8C0 355 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 CLEC1AQ8NC01 280 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 OR6T1Q8NGN1 323 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 PRCCQ92733 491 aaPredicted RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 MRPL24Q96A35 216 aaKnown RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 RAB40CQ96S21 281 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 PSMB7Q99436 277 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 HSD17B14Q9BPX1 270 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 NTMT1Q9BV86 223 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 RBM24Q9BX46 236 aaKnown RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 TRIM7Q9C029 511 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 ZDHHC6Q9H6R6 413 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 RNPEPL1Q9HAU8 725 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 PNPLA3Q9NST1 481 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 ABCB8Q9NUT2 735 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 ZNF581Q9P0T4 197 aa2.97□□□□□ -1.93
CHD1-203ENST00000505657 ZNF107Q9UII5 783 aaPredicted RBP2.97□□□□□ -1.93
CHD1-203ENST00000505657 LIPT1Q9Y234 373 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms