RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GSTM5P46439 218 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 SLC11A2P49281 568 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 AKR1D1P51857 326 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 AGFG1P52594 562 aaKnown RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 CRISP1P54107 249 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 EPHA5P54756 1037 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 DCDC1P59894 354 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HBA1P69905 142 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 SCARB2Q14108 478 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 IFI44LQ53G44 452 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 LRIF1Q5T3J3 769 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 TECPR1Q7Z6L1 1165 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 TEX26Q8N6G2 289 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF680Q8NEM1 530 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 MYLIPQ8WY64 445 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 TM9SF4Q92544 642 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 SLC9A6Q92581 669 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 MS4A3Q96HJ5 214 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HIST1H2AHQ96KK5 128 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 FERD3LQ96RJ6 166 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 TRIB3Q96RU7 358 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HIST1H2AJQ99878 128 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 H2AFJQ9BTM1 129 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 C1QTNF3Q9BXJ4 246 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 RBCK1Q9BYM8 510 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ANKRA2Q9H9E1 313 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 PLEKHB1Q9UF11 243 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 VPS9D1Q9Y2B5 631 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 RANBP2P49792 3224 aaKnown RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SERPINI2O75830 405 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SLC22A5O76082 557 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 RGS11O94810 467 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 ARHGEF15O94989 841 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 PLATP00750 562 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 TGFB1P01137 390 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 EBLN1P0CF75 366 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 AMD1P17707 334 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 ALDH9A1P49189 494 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 CLCN4P51793 760 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 WNT3P56703 355 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 RRAS2P62070 204 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SELENOWP63302 87 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 TLE2Q04725 743 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF91Q05481 1191 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 PIN1Q13526 163 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 C1DQ13901 141 aaKnown RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SPRYD7Q5W111 196 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 FRG2Q64ET8 278 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 LIPIQ6XZB0 460 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 USP50Q70EL3 339 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SERPINA11Q86U17 422 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 LAPTM4BQ86VI4 370 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 RDH10Q8IZV5 341 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 BOLLQ8N9W6 283 aaKnown RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 UXS1Q8NBZ7 420 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 BBS10Q8TAM1 723 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 KLHL6Q8WZ60 621 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 CRELD1Q96HD1 420 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SAMD11Q96NU1 681 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 FRG2BQ96QU4 278 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 SLC35A5Q9BS91 424 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 KATNB1Q9BVA0 655 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 C1QTNF7Q9BXJ2 289 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 GABARAPL1Q9H0R8 117 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 RRAGCQ9HB90 399 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 NANSQ9NR45 359 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 CXXC1Q9P0U4 656 aaPredicted RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 STUB1Q9UNE7 303 aa7.27□□□□□ -1.24
NEDD9-208ENST00000504387 EXO1Q9UQ84 846 aaKnown RBP7.27□□□□□ -1.24
NEDD9-208ENST00000504387 A0A0U1RQF3 1178 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF670-ZNF695F2Z2N8 137 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 EEF1E1O43324 174 aaKnown RBP7.27□□□□□ -1.25
NEDD9-208ENST00000504387 TBL1XO60907 577 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 C1QBP02746 253 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 SCG5P05408 212 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 NAT2P11245 290 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 ANXA8P13928 327 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 TYMPP19971 482 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 CORO1AP31146 461 aaKnown RBP7.27□□□□□ -1.25
NEDD9-208ENST00000504387 ATP5C1P36542 298 aaKnown RBP7.27□□□□□ -1.25
NEDD9-208ENST00000504387 ETV6P41212 452 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 RNF144AP50876 292 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-208ENST00000504387 C19orf57Q0VDD7 668 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 DOC2AQ14183 400 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 SEC23BQ15437 767 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 ZNF791Q3KP31 576 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-208ENST00000504387 CCSMST1Q4G0I0 132 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 XKR4Q5GH76 650 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 CRB2Q5IJ48 1285 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 FAM27D1Q5T7N8 215 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 KIAA1161Q6NSJ0 714 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 MZT2BQ6NZ67 158 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 IDO2Q6ZQW0 420 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 GET4Q7L5D6 327 aaPredicted RBP7.27□□□□□ -1.25
NEDD9-208ENST00000504387 TRIM46Q7Z4K8 759 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 C11orf96Q7Z7L8 435 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 GALNT7Q86SF2 657 aa7.27□□□□□ -1.25
NEDD9-208ENST00000504387 LRRTM4Q86VH4 590 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms