RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 MAPKAP1Q9BPZ7 522 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 USB1Q9BQ65 265 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SEC22CQ9BRL7 303 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TTYH2Q9BSA4 534 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MRI1Q9BV20 369 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CDCA4Q9BXL8 241 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TEX12Q9BXU0 123 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NAA50Q9GZZ1 169 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TOR3AQ9H497 397 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TCF7L1Q9HCS4 588 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM138Q9NPI0 162 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FBXL12Q9NXK8 326 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ADAM29Q9UKF5 820 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PACSIN3Q9UKS6 424 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 INVSQ9Y283 1065 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GPSM3Q9Y4H4 160 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FABP12A6NFH5 140 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PCP4L1A6NKN8 68 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 B4DXG7 233 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CLDN5O00501 218 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TNFRSF10CO14798 259 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PGLSO95336 258 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FADS2O95864 444 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 YWHABP31946 246 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GKP32189 559 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HSD17B2P37059 387 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 RAB10P61026 200 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FOXK1P85037 733 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EMX2Q04743 252 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF91Q05481 1191 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SRSF4Q08170 494 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LCP2Q13094 533 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NDUFA9Q16795 377 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MSS51Q4VC12 460 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ATP13A5Q4VNC0 1218 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 REP15Q6BDI9 236 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 AADACL2Q6P093 401 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLC27A4Q6P1M0 643 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 C3orf33Q6P1S2 294 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 KLHL17Q6TDP4 642 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 BTN2A1Q7KYR7 527 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NKAIN4Q8IVV8 208 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SULF1Q8IWU6 871 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ATPAF2Q8N5M1 289 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 YIPF7Q8N8F6 280 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF461Q8TAF7 563 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HAVCR2Q8TDQ0 301 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ASB15Q8WXK1 588 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TMBIM1Q969X1 311 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TCEAL4Q96EI5 215 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PWWP2AQ96N64 755 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 C12orf57Q99622 126 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MEAF6Q9HAF1 191 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 POLMQ9NP87 494 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 C19orf12Q9NSK7 152 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TRMT13Q9NUP7 481 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF624Q9P2J8 865 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NUFIP1Q9UHK0 495 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 USP18Q9UMW8 372 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 COPS3Q9UNS2 423 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DGKBQ9Y6T7 804 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 U3KQV3 271 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 A0A1W2PQ09 198 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 hCG_1807616A0A1W2PRN6 198 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ELOVL7A1L3X0 281 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLC9B1P1A6NJY1 282 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FGF10O15520 208 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TGOLN2O43493 480 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LYPLA1O75608 230 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CFBP00751 764 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CST1P01037 141 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IFNA10P01566 189 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PGRP06401 933 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PIPP12273 146 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PVALBP20472 110 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HTR2AP28223 471 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MIPP30301 263 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DNAJA1P31689 397 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CD68P34810 354 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EPHX2P34913 555 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DPP6P42658 865 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CENPAP49450 140 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FGFBP1Q14512 234 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LDLRAP1Q5SW96 308 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF684Q5T5D7 378 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GPR139Q6DWJ6 353 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 OR2T5Q6IEZ7 315 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SBSNQ6UWP8 590 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DEFB132Q7Z7B7 95 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CUZD1Q86UP6 607 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IQCHQ86VS3 1027 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EPHX4Q8IUS5 362 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 KDF1Q8NAX2 398 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PLA2G15Q8NCC3 412 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 OR2T29Q8NH02 315 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 OR56B4Q8NH76 319 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MAPK15Q8TD08 544 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 RNF139Q8WU17 664 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ATOH1Q92858 354 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms