RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LPCAT2Q7L5N7 544 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CATSPERDQ86XM0 798 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ELMOD2Q8IZ81 293 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TEX26Q8N6G2 289 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCDC185Q8N715 623 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAPK1IP1LQ8NDC0 245 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 EXOC6Q8TAG9 804 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF519Q8TB69 540 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 BRSK1Q8TDC3 778 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SEPT8Q92599 483 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 THRSPQ92748 146 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CASP10Q92851 521 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 RAB7BQ96AH8 199 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM186Q96B77 213 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 C14orf79Q96F83 325 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 CFAP36Q96G28 342 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SAMD8Q96LT4 415 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 NSMCE2Q96MF7 247 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF300Q96RE9 604 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 USP28Q96RU2 1077 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRT12Q99456 494 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ASCL2Q99929 193 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 THUMPD2Q9BTF0 503 aaKnown RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TEX13AQ9BXU3 409 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 OSBPL8Q9BZF1 889 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ACPTQ9BZG2 426 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 HOXD1Q9GZZ0 328 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 MTIF3Q9H2K0 278 aaKnown RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 C3orf14Q9HBI5 128 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPASTQ9UBP0 616 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 DBF4Q9UBU7 674 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TRIM10Q9UDY6 481 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 TSPAN16Q9UKR8 245 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 PLCL2Q9UPR0 1127 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 DDX49Q9Y6V7 483 aaKnown RBP2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF318Q5VUA4 2279 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 NEDD4P46934 1319 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM205AQ6ZU69 1335 aa2.08□□□□□ -2.08
HMGB1P35-201ENST00000503360 IGLV7-46A0A075B6I9 117 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 hCG_38984A0A1B0GV85 526 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 C2orf92A0A1B0GVN3 265 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM149AA5PLN7 773 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CFAP73A6NFT4 308 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 NPIPB9F8W1W9 429 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SGK1O00141 431 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 E2F3O00716 465 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SURF4O15260 269 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CLDN3O15551 220 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 GMFGO60234 142 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ECE2O60344 883 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 KLHL41O60662 606 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 LRCH4O75427 683 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CEACAM4O75871 244 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 IDH1O75874 414 aaKnown RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 DIRAS3O95661 229 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 AK1P00568 194 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 PDGFBP01127 241 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRT6BP04259 564 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRT8P05787 483 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCDC159P0C7I6 412 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZSCAN5DPP0CG00 497 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 HSPA5P11021 654 aaKnown RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 PDHBP11177 359 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 NCF1P14598 390 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CPA3P15088 417 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RPA1P27694 616 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 FEN1P39748 380 aaKnown RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC1A3P43003 542 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRT6CP48668 564 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SERPINH1P50454 418 aaKnown RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SH3BGRP55822 239 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 UCP2P55851 309 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TRA2BP62995 288 aaKnown RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 IRX4P78413 519 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CYCSP99999 105 aaKnown RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 DHODHQ02127 395 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SLC3A1Q07837 685 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ELP6Q0PNE2 266 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RIPK1Q13546 671 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TSTA3Q13630 321 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 GRB14Q14449 540 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 FAM189A2Q15884 450 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 LRRC23Q53EV4 343 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 PRAMEF8Q5VWM4 474 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TCEAL6Q6IPX3 200 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ARSKQ6UWY0 536 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCBE1Q6UXH8 406 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ISLR2Q6UXK2 745 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RFPL4BQ6ZWI9 263 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RUFY3Q7L099 469 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TAF8Q7Z7C8 310 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SYVN1Q86TM6 617 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ASPGQ86U10 573 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM126BQ8IUX1 230 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPAG16Q8N0X2 631 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM99Q8N816 258 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF614Q8N883 585 aa2.07□□□□□ -2.08
HMGB1P35-201ENST00000503360 RNF149Q8NC42 400 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms