RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CCL4L1Q8NHW4 92 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ZNF606Q8WXB4 792 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 STON2Q8WXE9 905 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 PPWD1Q96BP3 646 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 RTP4Q96DX8 246 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 HMCESQ96FZ2 354 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 REXO5Q96IC2 774 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 C1orf74Q96LT6 269 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 C5orf34Q96MH7 638 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 MUS81Q96NY9 551 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ZNF300Q96RE9 604 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 UQCC2Q9BRT2 126 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 C9orf16Q9BUW7 83 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ZYG11BQ9C0D3 744 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 SLAMF7Q9NQ25 335 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 WASH6PQ9NQA3 447 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 RASSF1Q9NS23 344 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ASNSD1Q9NWL6 643 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 EIF3KQ9UBQ5 218 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 TLK1Q9UKI8 766 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 STAP1Q9ULZ2 295 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CAB39Q9Y376 341 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 ACTL7AQ9Y615 435 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 SYNDIG1LA6NDD5 238 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 TMEM202A6NGA9 273 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 DRGXA6NNA5 263 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 B4E171 279 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CST8O60676 142 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ZNF780AO75290 641 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 HSPA4LO95757 839 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CLDN1O95832 211 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 F9P00740 461 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 EEF1B2P24534 225 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 CD1CP29017 333 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 GGT5P36269 586 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 DLSTP36957 453 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 RAD52P43351 418 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 MAGEA6P43360 314 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CBX5P45973 191 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 SULT1E1P49888 294 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 MRPS15P82914 257 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 GCNT1Q02742 428 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 DGUOKQ16854 277 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 PARP15Q460N3 678 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 TOR2AQ5JU69 321 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 C1QL3Q5VWW1 255 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 METTL2BQ6P1Q9 378 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 TMEM71Q6P5X7 295 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 UNC5DQ6UXZ4 953 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ZNF677Q86XU0 584 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 TMEM151BQ8IW70 566 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 TP53INP2Q8IXH6 220 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CCDC185Q8N715 623 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 KCT2Q8NC54 265 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 NAXEQ8NCW5 288 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 AGR3Q8TD06 166 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 OR1E3Q8WZA6 343 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 GTF2H4Q92759 462 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 SNAPC3Q92966 411 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 NINJ1Q92982 152 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 MARC2Q969Z3 335 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 OMA1Q96E52 524 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 YIPF6Q96EC8 236 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 NRBF2Q96F24 287 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CENPNQ96H22 339 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 CCDC120Q96HB5 630 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 SIGLEC10Q96LC7 697 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 PPP1R36Q96LQ0 422 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 SLC2A13Q96QE2 648 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 FERD3LQ96RJ6 166 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 KCTD14Q9BQ13 255 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 BCL7BQ9BQE9 202 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 ACAT2Q9BWD1 397 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 GATA5Q9BWX5 397 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 GSDMCQ9BYG8 508 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 FRMD8P1Q9BZ68 369 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 CARS2Q9HA77 564 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 SCPEP1Q9HB40 452 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 MRPL47Q9HD33 250 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 RPRD1BQ9NQG5 326 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 ACSS2Q9NR19 701 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 CHRAC1Q9NRG0 131 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 PIGVQ9NUD9 493 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 DDX28Q9NUL7 540 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 PAK1IP1Q9NWT1 392 aaPredicted RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 OPTCQ9UBM4 332 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 WARS2Q9UGM6 360 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 ATPIF1Q9UII2 106 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 OSGIN1Q9UJX0 560 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 NOSIPQ9Y314 301 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 SNX10Q9Y5X0 201 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 MRPS18BQ9Y676 258 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 OAS3Q9Y6K5 1087 aaKnown RBP4.3□□□□□ -1.72
MATR3-202ENST00000502422 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
MATR3-202ENST00000502422 LRP4O75096 1905 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 PCM1Q15154 2024 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 RNF103-CHMP3A0A140T963 221 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 PIPSLA2A3N6 862 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 FAM25AB3EWG3 89 aa4.29□□□□□ -1.72
MATR3-202ENST00000502422 FAM25CB3EWG5 89 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms