RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNF4-202ENST00000502316 LRRC8CQ8TDW0 803 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 DYDC1Q8WWB3 177 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 CKAP2Q8WWK9 683 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 TANKQ92844 425 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 C8orf44Q96CB5 159 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 TM4SF18Q96CE8 201 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 C3orf30Q96M34 536 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 C7orf26Q96N11 449 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 PTCHD1Q96NR3 888 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 ZNF700Q9H0M5 742 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 RPF2Q9H7B2 306 aaKnown RBP13.31□□□□□ -0.28
RNF4-202ENST00000502316 LRTM1Q9HBL6 345 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 PFDN4Q9NQP4 134 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 NECTIN3Q9NQS3 549 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 FBXL4Q9UKA2 621 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 TMED5Q9Y3A6 229 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 CACNA1BQ00975 2339 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
RNF4-202ENST00000502316 SEC22BO75396 215 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 RRADP55042 308 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 IGLV3-21P80748 117 aaPredicted RBP13.3□□□□□ -0.28
RNF4-202ENST00000502316 BTKQ06187 659 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 SLC13A2Q13183 592 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 TBR1Q16650 682 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 FAAH2Q6GMR7 532 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 NOXRED1Q6NXP6 359 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 BORAQ6PGQ7 559 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 NDUFAF7Q7L592 441 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 CPEB2Q7Z5Q1 589 aaKnown RBP13.3□□□□□ -0.28
RNF4-202ENST00000502316 C7orf57Q8NEG2 295 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 DNAJB14Q8TBM8 379 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 APOBEC4Q8WW27 367 aaKnown RBP13.3□□□□□ -0.28
RNF4-202ENST00000502316 ANKRD9Q96BM1 317 aaPredicted RBP13.3□□□□□ -0.28
RNF4-202ENST00000502316 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 MAGEB18Q96M61 343 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 FER1L6-AS2Q96M78 137 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 WDR77Q9BQA1 342 aaPredicted RBP13.3□□□□□ -0.28
RNF4-202ENST00000502316 WDR41Q9HAD4 459 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 RIC8BQ9NVN3 520 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 PNPOQ9NVS9 261 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 WBP11Q9Y2W2 641 aaKnown RBP13.3□□□□□ -0.28
RNF4-202ENST00000502316 CHD6Q8TD26 2715 aa13.3□□□□□ -0.28
RNF4-202ENST00000502316 ATP6AP2A0A1C7CYW4 349 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 GNG14A0A1W2PPG7 69 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 C1orf226A1L170 272 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 SLCO1B7G3V0H7 640 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 HDAC3O15379 428 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 KALRNO60229 2985 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 FGF17O60258 216 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 PRKRAO75569 313 aaKnown RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 ATP6AP2O75787 350 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 HPP00738 406 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 ANXA4P09525 319 aaPredicted RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 PRR35P0CG20 571 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 HK2P52789 917 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 TAS2R50P59544 299 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 RHDQ02161 417 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 EEF1A2Q05639 463 aaKnown RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 ZNF763Q0D2J5 394 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 TERF2Q15554 542 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 PDCD2Q16342 344 aaPredicted RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 SMU1Q2TAY7 513 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 ATP6AP1LQ52LC2 224 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 RFTN2Q52LD8 501 aaPredicted RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 CPZQ66K79 652 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 OR52E8Q6IFG1 317 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 LRRC34Q8IZ02 419 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 PIWIL2Q8TC59 973 aaKnown RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 C16orf78Q8WTQ4 265 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 TTC9Q92623 222 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 IMMP1LQ96LU5 166 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 TUBB6Q9BUF5 446 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 ING2Q9H160 280 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 MEAF6Q9HAF1 191 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 SLCO1B3Q9NPD5 702 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 VTI1BQ9UEU0 232 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 CES1P1Q9UKY3 287 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 DLGAP4Q9Y2H0 992 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 POLR3HQ9Y535 204 aaPredicted RBP13.29□□□□□ -0.28
RNF4-202ENST00000502316 PCDHA9Q9Y5H5 950 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 SCN2AQ99250 2005 aa13.29□□□□□ -0.28
RNF4-202ENST00000502316 NSG1A0A0A6YYJ2 146 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 PGRMC2O15173 223 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 LDB3O75112 727 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 MYO1DO94832 1006 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 IL3P08700 152 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 DRD2P14416 443 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 SOX8P57073 446 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 OR4D2P58180 307 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 RPL38P63173 70 aaKnown RBP13.28□□□□□ -0.28
RNF4-202ENST00000502316 FOLH1Q04609 750 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 BIKQ13323 160 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 SERTAD2Q14140 314 aa13.28□□□□□ -0.28
RNF4-202ENST00000502316 HEPACAMQ14CZ8 416 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms