RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NHLRC3Q5JS37 347 aa2.57□□□□□ -2
SMC4-227ENST00000497984 LIPJQ5W064 366 aa2.57□□□□□ -2
SMC4-227ENST00000497984 REP15Q6BDI9 236 aa2.57□□□□□ -2
SMC4-227ENST00000497984 NEPROQ6NW34 567 aa2.57□□□□□ -2
SMC4-227ENST00000497984 ARMCX5Q6P1M9 558 aa2.57□□□□□ -2
SMC4-227ENST00000497984 CYP4V2Q6ZWL3 525 aaPredicted RBP2.57□□□□□ -2
SMC4-227ENST00000497984 ZNF781Q8N8C0 355 aa2.57□□□□□ -2
SMC4-227ENST00000497984 AFAP1L1Q8TED9 768 aa2.57□□□□□ -2
SMC4-227ENST00000497984 SAP25Q8TEE9 199 aa2.57□□□□□ -2
SMC4-227ENST00000497984 DEPDC1BQ8WUY9 529 aa2.57□□□□□ -2
SMC4-227ENST00000497984 SEPT8Q92599 483 aa2.57□□□□□ -2
SMC4-227ENST00000497984 CORO2AQ92828 525 aa2.57□□□□□ -2
SMC4-227ENST00000497984 SDHCQ99643 169 aaPredicted RBP2.57□□□□□ -2
SMC4-227ENST00000497984 MTIF3Q9H2K0 278 aaKnown RBP2.57□□□□□ -2
SMC4-227ENST00000497984 PNNQ9H307 717 aaKnown RBP2.57□□□□□ -2
SMC4-227ENST00000497984 ASB8Q9H765 288 aa2.57□□□□□ -2
SMC4-227ENST00000497984 MRPL17Q9NRX2 175 aaKnown RBP2.57□□□□□ -2
SMC4-227ENST00000497984 MED17Q9NVC6 651 aa2.57□□□□□ -2
SMC4-227ENST00000497984 TERF2IPQ9NYB0 399 aa2.57□□□□□ -2
SMC4-227ENST00000497984 ZNF319Q9P2F9 582 aa2.57□□□□□ -2
SMC4-227ENST00000497984 CPQQ9Y646 472 aa2.57□□□□□ -2
SMC4-227ENST00000497984 LOC390937A0A1W2PQ73 354 aa2.56□□□□□ -2
SMC4-227ENST00000497984 GTPBP10A4D1E9 387 aaKnown RBP2.56□□□□□ -2
SMC4-227ENST00000497984 FOXI3A8MTJ6 420 aaPredicted RBP2.56□□□□□ -2
SMC4-227ENST00000497984 E2F3O00716 465 aa2.56□□□□□ -2
SMC4-227ENST00000497984 TBCAO75347 108 aaKnown RBP2.56□□□□□ -2
SMC4-227ENST00000497984 CSDE1O75534 798 aaKnown RBP2.56□□□□□ -2
SMC4-227ENST00000497984 RAD51DO75771 328 aa2.56□□□□□ -2
SMC4-227ENST00000497984 LETM1O95202 739 aaPredicted RBP2.56□□□□□ -2
SMC4-227ENST00000497984 HOXC4P09017 264 aaPredicted RBP2.56□□□□□ -2
SMC4-227ENST00000497984 PPP2R1AP30153 589 aa2.56□□□□□ -2
SMC4-227ENST00000497984 FHITP49789 147 aa2.56□□□□□ -2
SMC4-227ENST00000497984 CCR4P51679 360 aa2.56□□□□□ -2
SMC4-227ENST00000497984 RPS27AP62979 156 aaKnown RBP2.56□□□□□ -2
SMC4-227ENST00000497984 ARHGAP1Q07960 439 aa2.56□□□□□ -2
SMC4-227ENST00000497984 MFGE8Q08431 387 aaPredicted RBP2.56□□□□□ -2
SMC4-227ENST00000497984 PCK2Q16822 640 aa2.56□□□□□ -2
SMC4-227ENST00000497984 TIMM50Q3ZCQ8 353 aa2.56□□□□□ -2
SMC4-227ENST00000497984 MARC1Q5VT66 337 aa2.56□□□□□ -2
SMC4-227ENST00000497984 PM20D1Q6GTS8 502 aa2.56□□□□□ -2
SMC4-227ENST00000497984 CACUL1Q86Y37 369 aa2.56□□□□□ -2
SMC4-227ENST00000497984 SIAH3Q8IW03 269 aa2.56□□□□□ -2
SMC4-227ENST00000497984 KIAA1524Q8TCG1 905 aa2.56□□□□□ -2
SMC4-227ENST00000497984 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.56□□□□□ -2
SMC4-227ENST00000497984 RASL10BQ96S79 203 aa2.56□□□□□ -2
SMC4-227ENST00000497984 MLPHQ9BV36 600 aaPredicted RBP2.56□□□□□ -2
SMC4-227ENST00000497984 RAB9BQ9NP90 201 aa2.56□□□□□ -2
SMC4-227ENST00000497984 SH3GLB2Q9NR46 395 aa2.56□□□□□ -2
SMC4-227ENST00000497984 VPS18Q9P253 973 aa2.56□□□□□ -2
SMC4-227ENST00000497984 GMEB2Q9UKD1 530 aa2.56□□□□□ -2
SMC4-227ENST00000497984 CDH7Q9ULB5 785 aa2.56□□□□□ -2
SMC4-227ENST00000497984 TMED7Q9Y3B3 224 aa2.56□□□□□ -2
SMC4-227ENST00000497984 HBS1LQ9Y450 684 aaKnown RBP2.56□□□□□ -2
SMC4-227ENST00000497984 POMT1Q9Y6A1 747 aa2.56□□□□□ -2
SMC4-227ENST00000497984 CCDC162PA2VCL2 907 aa2.55□□□□□ -2
SMC4-227ENST00000497984 OR5H15A6NDH6 313 aa2.55□□□□□ -2
SMC4-227ENST00000497984 OOEPA6NGQ2 149 aa2.55□□□□□ -2
SMC4-227ENST00000497984 SDR42E2A6NKP2 422 aa2.55□□□□□ -2
SMC4-227ENST00000497984 ZNF724A8MTY0 619 aa2.55□□□□□ -2
SMC4-227ENST00000497984 TMCO5BA8MYB1 307 aa2.55□□□□□ -2
SMC4-227ENST00000497984 CCND3P30281 292 aaPredicted RBP2.55□□□□□ -2
SMC4-227ENST00000497984 NAAAQ02083 359 aa2.55□□□□□ -2
SMC4-227ENST00000497984 LTB4RQ15722 352 aa2.55□□□□□ -2
SMC4-227ENST00000497984 IQCCQ4KMZ1 466 aa2.55□□□□□ -2
SMC4-227ENST00000497984 AGAP6Q5VW22 663 aa2.55□□□□□ -2
SMC4-227ENST00000497984 CAVIN1Q6NZI2 390 aaKnown RBP2.55□□□□□ -2
SMC4-227ENST00000497984 ALKBH5Q6P6C2 394 aaKnown RBP2.55□□□□□ -2
SMC4-227ENST00000497984 DCLRE1AQ6PJP8 1040 aa2.55□□□□□ -2
SMC4-227ENST00000497984 EXOC4Q96A65 974 aa2.55□□□□□ -2
SMC4-227ENST00000497984 SNRNP40Q96DI7 357 aaKnown RBP2.55□□□□□ -2
SMC4-227ENST00000497984 RANBP9Q96S59 729 aa2.55□□□□□ -2
SMC4-227ENST00000497984 IDI2Q9BXS1 227 aa2.55□□□□□ -2
SMC4-227ENST00000497984 CUTCQ9NTM9 273 aa2.55□□□□□ -2
SMC4-227ENST00000497984 SENP1Q9P0U3 644 aa2.55□□□□□ -2
SMC4-227ENST00000497984 ETV7Q9Y603 341 aa2.55□□□□□ -2
SMC4-227ENST00000497984 WI2-2373I1.2A0A1W2PRP0 233 aa2.54□□□□□ -2
SMC4-227ENST00000497984 E7ENQ6 273 aa2.54□□□□□ -2
SMC4-227ENST00000497984 CTDSPLO15194 276 aa2.54□□□□□ -2
SMC4-227ENST00000497984 ZNF253O75346 499 aa2.54□□□□□ -2
SMC4-227ENST00000497984 UMPSP11172 480 aa2.54□□□□□ -2
SMC4-227ENST00000497984 SKILP12757 684 aa2.54□□□□□ -2
SMC4-227ENST00000497984 FRKP42685 505 aaPredicted RBP2.54□□□□□ -2
SMC4-227ENST00000497984 BRCC3P46736 316 aa2.54□□□□□ -2
SMC4-227ENST00000497984 PEX3P56589 373 aa2.54□□□□□ -2
SMC4-227ENST00000497984 FKBP1BP68106 108 aa2.54□□□□□ -2
SMC4-227ENST00000497984 AKAP17AQ02040 695 aaKnown RBP2.54□□□□□ -2
SMC4-227ENST00000497984 ZNF530Q6P9A1 599 aaPredicted RBP2.54□□□□□ -2
SMC4-227ENST00000497984 RFWD3Q6PCD5 774 aa2.54□□□□□ -2
SMC4-227ENST00000497984 ZNF600Q6ZNG1 722 aa2.54□□□□□ -2
SMC4-227ENST00000497984 ADGRD2Q7Z7M1 963 aa2.54□□□□□ -2
SMC4-227ENST00000497984 GLRX5Q86SX6 157 aa2.54□□□□□ -2
SMC4-227ENST00000497984 C17orf64Q86WR6 236 aa2.54□□□□□ -2
SMC4-227ENST00000497984 GVQW1Q8N7I0 195 aa2.54□□□□□ -2
SMC4-227ENST00000497984 SMYD1Q8NB12 490 aa2.54□□□□□ -2
SMC4-227ENST00000497984 ZNRF1Q8ND25 227 aa2.54□□□□□ -2
SMC4-227ENST00000497984 GANCQ8TET4 914 aa2.54□□□□□ -2
SMC4-227ENST00000497984 UBLCP1Q8WVY7 318 aaPredicted RBP2.54□□□□□ -2
SMC4-227ENST00000497984 ZNF274Q96GC6 653 aaPredicted RBP2.54□□□□□ -2
SMC4-227ENST00000497984 CDHR1Q96JP9 859 aa2.54□□□□□ -2
SMC4-227ENST00000497984 LRRC2Q9BYS8 371 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms