RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 TRPC1P48995 793 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 TERF1P54274 439 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 DHX9Q08211 1270 aaKnown RBP15.14■□□□□ 0.01
VIM-208ENST00000497849 CRYZQ08257 329 aaKnown RBP15.14■□□□□ 0.01
VIM-208ENST00000497849 C2orf54Q08AI8 447 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 CBLBQ13191 982 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 BBS9Q3SYG4 887 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 TOR1AIP1Q5JTV8 583 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
VIM-208ENST00000497849 GSTA5Q7RTV2 222 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 CLNKQ7Z7G1 428 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 TBC1D19Q8N5T2 526 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 CCDC89Q8N998 374 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 OR8K3Q8NH51 312 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 OR56A3Q8NH54 315 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 EEF1AKMT1Q8WVE0 214 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 PIGTQ969N2 578 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 NEIL2Q969S2 332 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 CCDC68Q9H2F9 335 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 ZFP64Q9NPA5 681 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 HOMER3Q9NSC5 361 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 CLCA3PQ9Y6N3 262 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 DSCAMO60469 2012 aa15.14■□□□□ 0.01
VIM-208ENST00000497849 A0A0G2JN53 185 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 MYOCOSA0A1B0GUC4 107 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 MBD3L4A6NDZ8 208 aaPredicted RBP15.13■□□□□ 0.01
VIM-208ENST00000497849 MBD3L5A6NJ08 208 aaPredicted RBP15.13■□□□□ 0.01
VIM-208ENST00000497849 EEF1E1-BLOC1S5C9J1V9 151 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 AP3B1O00203 1094 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 EEF1E1O43324 174 aaKnown RBP15.13■□□□□ 0.01
VIM-208ENST00000497849 VPS41P49754 854 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 RAB38P57729 211 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 BTN3A2P78410 334 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
VIM-208ENST00000497849 REEP5Q00765 189 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 TIAL1Q01085 375 aaKnown RBP eCLIP15.13■□□□□ 0.01
VIM-208ENST00000497849 DUSP8Q13202 625 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 ZNF791Q3KP31 576 aaPredicted RBP15.13■□□□□ 0.01
VIM-208ENST00000497849 PRAMEF20Q5VT98 475 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 SLC22A10Q63ZE4 541 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 NSUN5P2Q63ZY6 315 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 DUPD1Q68J44 220 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 LIX1Q8N485 282 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 MORN4Q8NDC4 146 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 TRPV3Q8NET8 790 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 PAQR8Q8TEZ7 354 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 SLC5A11Q8WWX8 675 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 TIMP4Q99727 224 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 OR8D2Q9GZM6 311 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 QPCTLQ9NXS2 382 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 RNF14Q9UBS8 474 aa15.13■□□□□ 0.01
VIM-208ENST00000497849 C15orf38-AP3S2A0A0A6YYH1 394 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 GOLGA6L10A0A0M3HER8 536 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 TCRBV7S3A2A0A539 114 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 SH3D21A4FU49 640 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 KRT14P02533 472 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 IFNA16P05015 189 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 SERPINA6P08185 405 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 BMP7P18075 431 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 CTSSP25774 331 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 OPRM1P35372 400 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 KCNJ2P63252 427 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 KRTAP1-1Q07627 177 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 SP140Q13342 867 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 CSHL1Q14406 222 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 LYPD8Q6UX82 237 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 FAM47BQ8NA70 645 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 PPP1R14CQ8TAE6 165 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 DAZLQ92904 295 aaKnown RBP15.12■□□□□ 0.01
VIM-208ENST00000497849 ISL2Q96A47 359 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 HSPBAP1Q96EW2 488 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 PERPQ96FX8 193 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 TSNARE1Q96NA8 513 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 KRT12Q99456 494 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 NPLQ9BXD5 320 aaPredicted RBP15.12■□□□□ 0.01
VIM-208ENST00000497849 PRDM14Q9GZV8 571 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 L2HGDHQ9H9P8 463 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 VTI1BQ9UEU0 232 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 BOKQ9UMX3 212 aaPredicted RBP15.12■□□□□ 0.01
VIM-208ENST00000497849 NPFFR2Q9Y5X5 522 aa15.12■□□□□ 0.01
VIM-208ENST00000497849 RAI1Q7Z5J4 1906 aaPredicted RBP15.11■□□□□ 0.01
VIM-208ENST00000497849 MBD3L3A6NE82 208 aaPredicted RBP15.11■□□□□ 0.01
VIM-208ENST00000497849 CNOT4O95628 575 aaKnown RBP15.11■□□□□ 0.01
VIM-208ENST00000497849 IL18BPO95998 194 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 PAMP19021 973 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 SLC1A2P43004 574 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 ASPHQ12797 758 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 WHAMMP3Q1A5X7 153 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 MPEG1Q2M385 716 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 PIGGQ5H8A4 983 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 LRRC8EQ6NSJ5 796 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 UGT3A1Q6NUS8 523 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 ZNF595Q8IYB9 648 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 OR5L2Q8NGL0 311 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 OR14A16Q8NHC5 309 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 MBD3L2Q8NHZ7 208 aaPredicted RBP15.11■□□□□ 0.01
VIM-208ENST00000497849 SLC2A12Q8TD20 617 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 CSF3RQ99062 836 aa15.11■□□□□ 0.01
VIM-208ENST00000497849 RBM24Q9BX46 236 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms