RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 IL10P22301 178 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 SLC5A2P31639 672 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 POLR2JP52435 117 aaKnown RBP17.21■□□□□ 0.35
RGP1-202ENST00000496906 FOXC1Q12948 553 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 DPY19L1Q2PZI1 675 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 ZNF385BQ569K4 471 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 SPANXN4Q5MJ08 99 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 OR52E8Q6IFG1 317 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 BLOC1S3Q6QNY0 202 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 GK5Q6ZS86 529 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 ZC3H7AQ8IWR0 971 aaKnown RBP17.21■□□□□ 0.35
RGP1-202ENST00000496906 DNAJB14Q8TBM8 379 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 PPCDCQ96CD2 204 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 IFT80Q9P2H3 777 aaPredicted RBP17.21■□□□□ 0.35
RGP1-202ENST00000496906 ZNF282Q9UDV7 671 aaPredicted RBP17.21■□□□□ 0.35
RGP1-202ENST00000496906 MRPS33Q9Y291 106 aaKnown RBP17.21■□□□□ 0.35
RGP1-202ENST00000496906 BLACEA4D250 179 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 CDRT15L2A8MXV6 281 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 JRKO75564 520 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 BMP10O95393 424 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 RBMS1P29558 406 aaKnown RBP17.2■□□□□ 0.34
RGP1-202ENST00000496906 ERV3-1Q14264 604 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 PRSS53Q2L4Q9 553 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 FAM174BQ3ZCQ3 159 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 FAM198BQ6UWH4 519 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 C6orf15Q6UXA7 325 aaPredicted RBP17.2■□□□□ 0.34
RGP1-202ENST00000496906 OVCH1Q7RTY7 1134 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 TIPARPQ7Z3E1 657 aaKnown RBP17.2■□□□□ 0.34
RGP1-202ENST00000496906 ZNF595Q8IYB9 648 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 MR1Q95460 341 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 FKBP10Q96AY3 582 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 COQ8BQ96D53 544 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 TGIF2Q9GZN2 237 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 CHST8Q9H2A9 424 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 SLC26A1Q9H2B4 701 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 ASCL3Q9NQ33 180 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 LANCL2Q9NS86 450 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 TAS2R7Q9NYW3 318 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 SH3BP4Q9P0V3 963 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 UTS2RQ9UKP6 389 aa17.2■□□□□ 0.34
RGP1-202ENST00000496906 NR5A2O00482 541 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 CDC123O75794 336 aaPredicted RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 DXOO77932 396 aaKnown RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 ALBP02768 609 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 LAMP1P11279 417 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 KCNK10P57789 538 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 SRSF11Q05519 484 aaKnown RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 ACTN3Q08043 901 aaPredicted RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 MAP7Q14244 749 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 RTP5Q14D33 572 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 VWA2Q5GFL6 755 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 CPTPQ5TA50 214 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 MRPL14Q6P1L8 145 aaKnown RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 FAM199XQ6PEV8 388 aaPredicted RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 OR8J2Q8NGG1 315 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 STT3BQ8TCJ2 826 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 TANKQ92844 425 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 PRPF18Q99633 342 aaKnown RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 SLC52A3Q9NQ40 469 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 KLK13Q9UKR3 277 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 WASF3Q9UPY6 502 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 SDK2Q58EX2 2172 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 B4GALT2O60909 372 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 IL6P05231 212 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 PGRP06401 933 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 CAPN3P20807 821 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 CD82P27701 267 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 KIR3DL1P43629 444 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 DGKQP52824 942 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 PHC1P78364 1004 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 MAPRE2Q15555 327 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 MPEG1Q2M385 716 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 PGS1Q32NB8 556 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 C6orf89Q6UWU4 347 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 TSPEARQ8WU66 669 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 EXOSC8Q96B26 276 aaKnown RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 KLHL29Q96CT2 875 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 SPDL1Q96EA4 605 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 DUSP26Q9BV47 211 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 BHLHE41Q9C0J9 482 aaPredicted RBP17.19■□□□□ 0.34
RGP1-202ENST00000496906 ATAD3AQ9NVI7 634 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 C14orf105Q9NVL8 296 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 PSME2Q9UL46 239 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 PADI1Q9ULC6 663 aa17.19■□□□□ 0.34
RGP1-202ENST00000496906 VSTM2BA6NLU5 285 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 CLDN4O14493 209 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 FGF17O60258 216 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 LDB3O75112 727 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
RGP1-202ENST00000496906 SNRPB2P08579 225 aaKnown RBP17.18■□□□□ 0.34
RGP1-202ENST00000496906 ZGLP1P0C6A0 271 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 DDX5P17844 614 aaKnown RBP17.18■□□□□ 0.34
RGP1-202ENST00000496906 S100A3P33764 101 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 WNT3P56703 355 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 FOLH1Q04609 750 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 OCA2Q04671 838 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 NKG7Q16617 165 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 VPS26BQ4G0F5 336 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 TIGD2Q4W5G0 525 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 MLIPQ5VWP3 458 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms