RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 NSRP1Q9H0G5 558 aaKnown RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 BLZF1Q9H2G9 400 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 TLE6Q9H808 572 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 Q9H8V8 135 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 BATF3Q9NR55 127 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 AGPAT5Q9NUQ2 364 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 MAD2L2Q9UI95 211 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 SNX8Q9Y5X2 465 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 CSNK1G3Q9Y6M4 447 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 DDX60LQ5H9U9 1706 aaKnown RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 NHSQ6T4R5 1651 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PFASO15067 1338 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 FAM205AQ6ZU69 1335 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 DOT1LQ8TEK3 1739 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 FOCADQ5VW36 1801 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 LOXHD1Q8IVV2 1947 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TCRBV21S2A2A0A5A6 115 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 GMNCA6NCL1 334 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TRIM49BA6NDI0 452 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ZNF233A6NK53 670 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CCDC169A6NNP5 214 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MIF4GDA9UHW6 222 aaKnown RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 C2CD4DB7Z1M9 353 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 PDXKO00764 312 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 PTGESO14684 152 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NDC80O14777 642 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ZNF263O14978 683 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CETN3O15182 167 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TRAPPC3O43617 180 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 PRDM1O75626 825 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NUDT17P0C025 328 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TSPY3P0CV98 308 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TSPY8P0CW00 308 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 IRF2P14316 349 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 FERP16591 822 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 LHCGRP22888 699 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ATP5DP30049 168 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ASCL1P50553 236 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NAPAP54920 295 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MYL7Q01449 175 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MECOMQ03112 1051 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 C2orf54Q08AI8 447 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 XRCC4Q13426 336 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 RPS6KA1Q15418 735 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MAPRE1Q15691 268 aaKnown RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TAB1Q15750 504 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 SNCBQ16143 134 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 SLC15A2Q16348 729 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CCDC40Q4G0X9 1142 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TTMPQ5BVD1 217 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 SUSD4Q5VX71 490 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ZNF774Q6NX45 483 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 C6orf89Q6UWU4 347 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 SLFN11Q7Z7L1 901 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NLRP14Q86W24 1093 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CATSPERDQ86XM0 798 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 LMNTD2Q8IXW0 634 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 LGI2Q8N0V4 545 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 KIAA0895Q8NCT3 520 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 C17orf47Q8NEP4 570 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 OR5T2Q8NGG2 359 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 OR2L2Q8NH16 312 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ERMNQ8TAM6 284 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 SDR42E1Q8WUS8 393 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MOB3AQ96BX8 217 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NXNL1Q96CM4 212 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 PGM2Q96G03 612 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CCDC43Q96MW1 224 aaKnown RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 AGAP4Q96P64 663 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ZIM3Q96PE6 472 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MTMR9Q96QG7 549 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CCT8L2Q96SF2 557 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ROPN1BQ9BZX4 212 aaPredicted RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 HOXD1Q9GZZ0 328 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 CARD9Q9H257 536 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NOL11Q9H8H0 719 aaKnown RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 ROPN1Q9HAT0 212 aaPredicted RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TMBIM4Q9HC24 238 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MYNNQ9NPC7 610 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TRIM10Q9UDY6 481 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 SLC12A6Q9UHW9 1150 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MUTYHQ9UIF7 546 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 NIP7Q9Y221 180 aaKnown RBP eCLIP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 TRAF3IP3Q9Y228 551 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 UTP11Q9Y3A2 253 aaKnown RBP3.45□□□□□ -1.86
TRIM4-205ENST00000496896 WIPI2Q9Y4P8 454 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MYH10P35580 1976 aa3.45□□□□□ -1.86
TRIM4-205ENST00000496896 MYH7BA7E2Y1 1941 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 SMCO2A6NFE2 343 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 LIN7AO14910 233 aaPredicted RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 CALUO43852 315 aaPredicted RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 PALMO75781 387 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 ATP5HO75947 161 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 BEST1O76090 585 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 LUC7L3O95232 432 aaKnown RBP3.44□□□□□ -1.86
TRIM4-205ENST00000496896 AGTP01019 485 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 IGHV3-13P01766 116 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 IGHEP01854 428 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 H2AFZP0C0S5 128 aa3.44□□□□□ -1.86
TRIM4-205ENST00000496896 GAP43P17677 238 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms