RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GGTA1PQ4G0N0 100 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 KRTCAP3Q53RY4 240 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 C1QL3Q5VWW1 255 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 OR4C11Q6IEV9 310 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 MTFR2Q6P444 385 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 LCA5Q86VQ0 697 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 CYP4Z2PQ8N1L4 340 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 TMEM156Q8N614 296 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 OR8K3Q8NH51 312 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 MTBPQ96DY7 904 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 MAGED4Q96JG8 741 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF717Q9BY31 904 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-213ENST00000496347 ALOXE3Q9BYJ1 711 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 LYARQ9NX58 379 aaKnown RBP14.64□□□□□ -0.07
HDAC4-213ENST00000496347 PSD3Q9NYI0 1048 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 COPS7AQ9UBW8 275 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 PCTPQ9UKL6 214 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 NFU1Q9UMS0 254 aa14.64□□□□□ -0.07
HDAC4-213ENST00000496347 YARS2Q9Y2Z4 477 aaKnown RBP14.64□□□□□ -0.07
HDAC4-213ENST00000496347 GTF3C1Q12789 2109 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 A0A0A6YYD5 115 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 LRRC14BA6NHZ5 514 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 C17orf105B2RV13 164 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SAP18O00422 153 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SLC19A2O60779 497 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 LDB3O75112 727 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SH3BGRLO75368 114 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SNRPAP09012 282 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 TLX1P31314 330 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 ARL1P40616 181 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 BUD31P41223 144 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 CA7P43166 264 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SSR4P51571 173 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 CCNG1P51959 295 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 CASP6P55212 293 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 RPS13P62277 151 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SLAMF1Q13291 335 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 BIKQ13323 160 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 ZRSR2Q15696 482 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 MAPKAPK3Q16644 382 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 LGSNQ5TDP6 509 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 HSDL2Q6YN16 418 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 GPR180Q86V85 440 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 FJX1Q86VR8 437 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF227Q86WZ6 799 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 NUDT13Q86X67 352 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SIAH3Q8IW03 269 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 WDR20Q8TBZ3 569 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 PTPMT1Q8WUK0 201 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 TRIM44Q96DX7 344 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SCYL1Q96KG9 808 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 PELOQ9BRX2 385 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 NTMT1Q9BV86 223 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 NOL11Q9H8H0 719 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 DDX31Q9H8H2 851 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF358Q9NW07 568 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 MYOTQ9UBF9 498 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 SUCOQ9UBS9 1254 aaKnown RBP14.63□□□□□ -0.07
HDAC4-213ENST00000496347 FETUBQ9UGM5 382 aa14.63□□□□□ -0.07
HDAC4-213ENST00000496347 NCOA6Q14686 2063 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 OR7A17O14581 309 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 DYRK3O43781 588 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 FGF17O60258 216 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 RPS17P08708 135 aaKnown RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 NR2F6P10588 404 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 STT3AP46977 705 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 ST13P50502 369 aaKnown RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 TRAF3Q13114 568 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 FRG2Q64ET8 278 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 ADGRG4Q8IZF6 3080 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 OR52B6Q8NGF0 335 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 SLC2A12Q8TD20 617 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 TANKQ92844 425 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 ANKRD9Q96BM1 317 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 PHF21BQ96EK2 531 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 ART5Q96L15 291 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 FRG2BQ96QU4 278 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 SERPINI1Q99574 410 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 SORBS1Q9BX66 1292 aaKnown RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 C1QTNF3Q9BXJ4 246 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 OR8D2Q9GZM6 311 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 RPF2Q9H7B2 306 aaKnown RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 TIMMDC1Q9NPL8 285 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 RYDENQ9NUL5 291 aaKnown RBP14.62□□□□□ -0.07
HDAC4-213ENST00000496347 RNF11Q9Y3C5 154 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 MYO9AB2RTY4 2548 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 CACNA1CQ13936 2221 aa14.62□□□□□ -0.07
HDAC4-213ENST00000496347 LRBAP50851 2863 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 ABCA12Q86UK0 2595 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 TRGV8A0A0C4DH27 118 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 A8MVJ9 347 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 KLRC4-KLRK1H3BQV0 150 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 RIPK2O43353 540 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 PRKNO60260 465 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-213ENST00000496347 ZG16O60844 167 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 OR2J2O76002 312 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 OTCP00480 354 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 HNRNPH2P55795 449 aaKnown RBP14.61□□□□□ -0.07
HDAC4-213ENST00000496347 FOLH1Q04609 750 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms