RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ANKRD7Q92527 254 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 LRRC39Q96DD0 335 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 CNPPD1Q9BV87 410 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 SORBS1Q9BX66 1292 aaKnown RBP11.7□□□□□ -0.54
SKA1-205ENST00000494518 DERL2Q9GZP9 239 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 SEMA4BQ9NPR2 832 aaPredicted RBP11.7□□□□□ -0.54
SKA1-205ENST00000494518 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 ALKBH4Q9NXW9 302 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 MOCS1Q9NZB8 636 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 GPRC5BQ9NZH0 403 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 CD274Q9NZQ7 290 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 FAM215AQ9Y5M1 114 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
SKA1-205ENST00000494518 EXPH5Q8NEV8 1989 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 A0A0G2JNJ9 132 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 HRKO00198 91 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 TP73O15350 636 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 STK16O75716 305 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 LRATO95237 230 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 WISP3O95389 354 aaPredicted RBP11.69□□□□□ -0.54
SKA1-205ENST00000494518 GLI4P10075 376 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 PCNAP12004 261 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 EPORP19235 508 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 CNR1P21554 472 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 PIGAP37287 484 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 ADH7P40394 386 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 ASPHQ12797 758 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 CHIT1Q13231 466 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 FRG1Q14331 258 aaKnown RBP11.69□□□□□ -0.54
SKA1-205ENST00000494518 PDK4Q16654 411 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 RTL6Q6ICC9 239 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 ACAD11Q709F0 780 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 TRILQ7L0X0 811 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 LIX1LQ8IVB5 337 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 FAM109AQ8N4B1 249 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 MORN4Q8NDC4 146 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 PPWD1Q96BP3 646 aaKnown RBP11.69□□□□□ -0.54
SKA1-205ENST00000494518 PTCD3Q96EY7 689 aaKnown RBP11.69□□□□□ -0.54
SKA1-205ENST00000494518 FAM173AQ9BQD7 235 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 TTYH2Q9BSA4 534 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 LDAHQ9H6V9 325 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 EXO5Q9H790 373 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 NT5DC2Q9H857 520 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 IL1RL2Q9HB29 575 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 SACM1LQ9NTJ5 587 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 Q9UFV3 132 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 VPS13CQ709C8 3753 aa11.69□□□□□ -0.54
SKA1-205ENST00000494518 NIPBLQ6KC79 2804 aaeCLIP11.69□□□□□ -0.54
SKA1-205ENST00000494518 FIGNL2A6NMB9 653 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 EFCAB8A8MWE9 144 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 FOXO6A8MYZ6 492 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ZSCAN12O43309 604 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 FGF17O60258 216 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 PRKRAO75569 313 aaKnown RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 ZWINTO95229 277 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 NADKO95544 446 aaPredicted RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 TGFB1P01137 390 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 P04436 131 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 HOXD4P09016 255 aaPredicted RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 CD1DP15813 335 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 TCP1P17987 556 aaKnown RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 CPN2P22792 545 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ATP5A1P25705 553 aaKnown RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 GSTM2P28161 218 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 SSTR1P30872 391 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 SSR2P43308 183 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 RPL21P46778 160 aaKnown RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 KCNC1P48547 511 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 MAN2A2P49641 1150 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 LSM11P83369 360 aaKnown RBP eCLIP11.68□□□□□ -0.54
SKA1-205ENST00000494518 POU4F1Q01851 419 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 IRF8Q02556 426 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 TGM3Q08188 693 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 FOXO1Q12778 655 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 DDX39BQ13838 428 aaKnown RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 RCN2Q14257 317 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 EFTUD2Q15029 972 aaKnown RBP eCLIP11.68□□□□□ -0.54
SKA1-205ENST00000494518 NDUFAF5Q5TEU4 345 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 PRAMEF20Q5VT98 475 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 B3GNT6Q6ZMB0 384 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 DGAT2L6Q6ZPD8 337 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 SYDE1Q6ZW31 735 aaPredicted RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 WDR53Q7Z5U6 358 aaPredicted RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 TCAIMQ8N3R3 496 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ZNF721Q8TF20 911 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 ANKRD9Q96BM1 317 aaPredicted RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 KCNC2Q96PR1 638 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 MCMBPQ9BTE3 642 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 EFCAB11Q9BUY7 163 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 CAPS2Q9BXY5 557 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 MS4A8Q9BY19 250 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 OR51B5Q9H339 312 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 CNOT10Q9H9A5 744 aaKnown RBP11.68□□□□□ -0.54
SKA1-205ENST00000494518 POPDC3Q9HBV1 291 aa11.68□□□□□ -0.54
SKA1-205ENST00000494518 SPRR3Q9UBC9 169 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms