RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ADAMTS20P59510 1910 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TRBV23OR9-2A0A075B6M9 112 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 KIR2DS5A0A0G2JLQ3 304 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 A0A0G2JNG1 304 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SPTY2D1-AS1A0A0U1RR47 76 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SMIM31A0A1B0GVY4 71 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 A0A1W2PPC4 97 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 A0A1W2PR48 441 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 GSAPA4D1B5 854 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 OR6C74A6NCV1 312 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 KIR2DS3K7RE56 304 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SUV39H1O43463 412 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TNFSF14O43557 240 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 HS6ST1O60243 411 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 DPM1O60762 260 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 CTSVO60911 334 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 OR6B1O95007 311 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 ATP6V1B1P15313 513 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 POLR2CP19387 275 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TNFRSF1BP20333 461 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 RPL5P46777 297 aaKnown RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 ALDH3B2P48448 385 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 CDH15P55291 814 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 RAB8AP61006 207 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 STXBP1P61764 594 aaKnown RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 DUSP2Q05923 314 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SLAMF1Q13291 335 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 KIR2DS5Q14953 304 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SKIV2LQ15477 1246 aaKnown RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 MAPK11Q15759 364 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 IFI44LQ53G44 452 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 FCRL6Q6DN72 434 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TNFAIP8L2Q6P589 184 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TTC33Q6PID6 262 aaPredicted RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TMEM64Q6YI46 380 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 RNF44Q7L0R7 432 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 DGLUCYQ7Z3D6 616 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 FRMD1Q8N878 549 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TSPAN14Q8NG11 270 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SUN3Q8TAQ9 357 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SFXN5Q8TD22 340 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SLC22A18Q96BI1 424 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TMEM19Q96HH6 336 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TPD52L3Q96J77 140 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 AMDHD1Q96NU7 426 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 DOHHQ9BU89 302 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 LRRC61Q9BV99 259 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 YIPF3Q9GZM5 350 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 GLIPR2Q9H4G4 154 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 CLK4Q9HAZ1 481 aaKnown RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SLC35C2Q9NQQ7 365 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 THUMPD1Q9NXG2 353 aaKnown RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 CPNE7Q9UBL6 633 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 ATG4BQ9Y4P1 393 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 PCDHGA2Q9Y5H1 932 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 KLK4Q9Y5K2 254 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 SNX8Q9Y5X2 465 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 U3KQV3 271 aa10.09□□□□□ -0.79
CLCN6-208ENST00000494028 TDRD6O60522 2096 aaKnown RBP10.09□□□□□ -0.79
CLCN6-208ENST00000494028 PRUNE2Q8WUY3 3088 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 TNRC6BQ9UPQ9 1833 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 A0A0J9YY10 115 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 A0A1W2PS29 197 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 KRBA1A5PL33 1030 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 PRAMEF25A6NGN4 478 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 MYO1GB0I1T2 1018 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 MITFO75030 526 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 FKBP9O95302 570 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 VIPP01282 170 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 C9P02748 559 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 BCHEP06276 602 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF888P0CJ79 500 aaPredicted RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 NR2F6P10588 404 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 IL9P15248 144 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 CD247P20963 164 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 IGFBP5P24593 272 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 DNAJA1P31689 397 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 LSSP48449 732 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 KHKP50053 298 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 MANFP55145 182 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 TUBA4AP68366 448 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 TNFRSF17Q02223 184 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 RGS1Q08116 209 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 FZD5Q13467 585 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 SLC9A5Q14940 896 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 RFX4Q33E94 735 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 CNPY1Q3B7I2 92 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 LEXMQ3ZCV2 418 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 SPDYE7PQ495Y7 208 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 ZC3H12BQ5HYM0 836 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 CRB2Q5IJ48 1285 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 SLC48A1Q6P1K1 146 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 CEACAM20Q6UY09 585 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 PARGQ86W56 976 aa10.08□□□□□ -0.8
CLCN6-208ENST00000494028 DCP2Q8IU60 420 aaKnown RBP10.08□□□□□ -0.8
CLCN6-208ENST00000494028 FAM160A2Q8N612 972 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms