RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 KIAA0895LQ68EN5 471 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 RIPOR1Q6ZS17 1223 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 GDPD3Q7L5L3 318 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 CEP97Q8IW35 865 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ZCCHC9Q8N567 271 aaKnown RBP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 CADM4Q8NFZ8 388 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ELP5Q8TE02 316 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 C1orf54Q8WWF1 131 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 KLK6Q92876 244 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 FAM131CQ96AQ9 280 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 MTERF3Q96E29 417 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 RNF170Q96K19 258 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 RBM15Q96T37 977 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 MYOCQ99972 504 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 MED18Q9BUE0 208 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ASPSCR1Q9BZE9 553 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ROPN1BQ9BZX4 212 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 SHARPINQ9H0F6 387 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 SMOC1Q9H4F8 434 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ESRP2Q9H6T0 727 aaKnown RBP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ARL8BQ9NVJ2 186 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 AKAP7Q9P0M2 348 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 WARS2Q9UGM6 360 aaKnown RBP11.09□□□□□ -0.63
BRCA1-222ENST00000493919 NDRG3Q9UGV2 375 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 DNPEPQ9ULA0 475 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 MGAT4BQ9UQ53 548 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 RAI2Q9Y5P3 530 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 RNF215Q9Y6U7 377 aa11.09□□□□□ -0.63
BRCA1-222ENST00000493919 ZNF292O60281 2723 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 RFPL4AA6NLU0 287 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 IQCF5A8MTL0 148 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 RFPL4AL1F8VTS6 287 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 M0R3H8 397 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 SLC25A17O43808 307 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 LZTS3O60299 673 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-222ENST00000493919 PRKRAO75569 313 aaKnown RBP11.08□□□□□ -0.64
BRCA1-222ENST00000493919 TM7SF2O76062 418 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 IGHV4-34P06331 123 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 IL7P13232 177 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 PAMP19021 973 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 CA4P22748 312 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 EEF1DP29692 281 aaKnown RBP11.08□□□□□ -0.64
BRCA1-222ENST00000493919 MAGEA4P43358 317 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 PRRX1P54821 245 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 SPEM2Q0P670 501 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 CAMK2DQ13557 499 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 TAF1BQ53T94 588 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-222ENST00000493919 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 OTOAQ7RTW8 1153 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 PID1Q7Z2X4 250 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 VN1R5Q7Z5H4 357 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF567Q8N184 647 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF511Q8NB15 262 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 AGBL5Q8NDL9 886 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 ARRDC2Q8TBH0 407 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 WRAP53Q9BUR4 548 aaKnown RBP11.08□□□□□ -0.64
BRCA1-222ENST00000493919 IL26Q9NPH9 171 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 NSMCE4AQ9NXX6 385 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 ZNF224Q9NZL3 707 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 AP4B1Q9Y6B7 739 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 RIF1Q5UIP0 2472 aaKnown RBP11.08□□□□□ -0.64
BRCA1-222ENST00000493919 PLXNA2O75051 1894 aa11.08□□□□□ -0.64
BRCA1-222ENST00000493919 A0A1W2PQU0 124 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 TSPAN11A1L157 253 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 H3BNH8 94 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 DVL2O14641 736 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 SPINT1O43278 529 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 SIGLEC6O43699 453 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 CFIP05156 583 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 FHP07954 510 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 CD1EP15812 388 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 TACR3P29371 465 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 PREPP48147 710 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 HSF2Q03933 536 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 SF3A3Q12874 501 aaKnown RBP eCLIP11.07□□□□□ -0.64
BRCA1-222ENST00000493919 TAB1Q15750 504 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 PAGE2BQ5JRK9 111 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 LIPJQ5W064 366 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 SEL1L3Q68CR1 1132 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 LRFN4Q6PJG9 635 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 CLNKQ7Z7G1 428 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 TP53I13Q8NBR0 393 aaPredicted RBP11.07□□□□□ -0.64
BRCA1-222ENST00000493919 SPATA22Q8NHS9 363 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 ECHDC3Q96DC8 303 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 LOXL4Q96JB6 756 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 KLHL15Q96M94 604 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 VAT1Q99536 393 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 TMEM121Q9BTD3 319 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 PCED1AQ9H1Q7 454 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 OPA3Q9H6K4 179 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 NANOGQ9H9S0 305 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 FZD3Q9NPG1 666 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 TMEM74BQ9NUR3 256 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 UBP1Q9NZI7 540 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 PPP4R1LQ9P1A2 415 aa11.07□□□□□ -0.64
BRCA1-222ENST00000493919 MIOXQ9UGB7 285 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms