RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 RNF212Q495C1 297 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 LRRC38Q5VT99 294 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 LIPJQ5W064 366 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 REP15Q6BDI9 236 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 RFWD3Q6PCD5 774 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 C11orf88Q6PI97 169 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 SIGLEC15Q6ZMC9 328 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 AQP12AQ8IXF9 295 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 GPR148Q8TDV2 347 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 GANCQ8TET4 914 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 TEKT1Q969V4 418 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 CCDC114Q96M63 670 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 S1PR3Q99500 378 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 SSX3Q99909 188 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 IDI2Q9BXS1 227 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 ZNF350Q9GZX5 532 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 ZCCHC17Q9NP64 241 aaKnown RBP3.19□□□□□ -1.9
ITGB1-216ENST00000493758 GMEB2Q9UKD1 530 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 LIPT1Q9Y234 373 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 SLC6A5Q9Y345 797 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 CPQQ9Y646 472 aa3.19□□□□□ -1.9
ITGB1-216ENST00000493758 ATP9AO75110 1047 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 GLCEO94923 617 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 CCDC159P0C7I6 412 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 PPP2R1AP30153 589 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 MATKP42679 507 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 PEX3P56589 373 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 NAAAQ02083 359 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 GABPAQ06546 454 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ANKRD20A4Q4UJ75 823 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ANKRD20A8PQ5CZ79 823 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ANKRD20A2Q5SQ80 823 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ANKRD20A1Q5TYW2 823 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ANKRD20A3Q5VUR7 823 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 LYPLAL1Q5VWZ2 237 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ALKBH5Q6P6C2 394 aaKnown RBP3.18□□□□□ -1.9
ITGB1-216ENST00000493758 GALNTL5Q7Z4T8 443 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 RHOXF1Q8NHV9 184 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 CDHR1Q96JP9 859 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ERGIC2Q96RQ1 377 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ZNF559Q9BR84 538 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ZBP1Q9H171 429 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 LIME1Q9H400 295 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 AMBNQ9NP70 447 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 SH3GLB2Q9NR46 395 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 TMEM161AQ9NX61 479 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 SENP1Q9P0U3 644 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ARMCX3Q9UH62 379 aaPredicted RBP3.18□□□□□ -1.9
ITGB1-216ENST00000493758 ZNF346Q9UL40 294 aaKnown RBP3.18□□□□□ -1.9
ITGB1-216ENST00000493758 SH3GLB1Q9Y371 365 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 NAALAD2Q9Y3Q0 740 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 POGZQ7Z3K3 1410 aa3.18□□□□□ -1.9
ITGB1-216ENST00000493758 MAGEB16A2A368 324 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 TMCO5BA8MYB1 307 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 PSMA7O14818 248 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 THY1P04216 161 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 SKILP12757 684 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 KCNJ1P48048 391 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 SLC34A1Q06495 639 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 HSPA14Q0VDF9 509 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 ITPK1Q13572 414 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 NHSL2Q5HYW2 709 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 CAPN13Q6MZZ7 669 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-216ENST00000493758 PAMR1Q6UXH9 720 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 ZNF730Q6ZMV8 503 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 OTOAQ7RTW8 1153 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 HIPK1Q86Z02 1210 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 OR6T1Q8NGN1 323 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 CYYR1Q96J86 154 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 ADPGKQ9BRR6 497 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 SLITRK2Q9H156 845 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 PNPLA3Q9NST1 481 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 GTF3C4Q9UKN8 822 aa3.17□□□□□ -1.9
ITGB1-216ENST00000493758 TEX48A0A1B0GUV7 120 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CHUKO15111 745 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 B4GAT1O43505 415 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CT45A8P0DMV1 189 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CT45A9P0DMV2 189 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 GJB2P29033 226 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 ASIC1P78348 528 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 TSPY1Q01534 308 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 OR1C1Q15619 314 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 STXBP2Q15833 593 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CT45A2Q5DJT8 189 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 SNRNP48Q6IEG0 339 aaKnown RBP3.16□□□□□ -1.9
ITGB1-216ENST00000493758 LINC00696Q6ZRV3 163 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 KRT77Q7Z794 578 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CCDC71Q8IV32 467 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-216ENST00000493758 OR8H3Q8N146 312 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 NUP93Q8N1F7 819 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 KLHL30-AS1Q8NEE0 82 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 SPATA18Q8TC71 538 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 KIAA1524Q8TCG1 905 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 TCP11Q8WWU5 503 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 ZNF274Q96GC6 653 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CDKN2AIPNLQ96HQ2 116 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 NT5DC2Q9H857 520 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 PLEK2Q9NYT0 353 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 CIDEBQ9UHD4 219 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms