RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PRRC2BQ5JSZ5 2229 aaKnown RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PRAMEF33A0A0G2JMD5 474 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 OTOL1A6NHN0 477 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TTC36A6NLP5 189 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 EFCAB9A8MZ26 197 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 H7BY64 318 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 FAAHO00519 579 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 FOXD2O60548 495 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PRAMEF10O60809 474 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 SULT1C4O75897 302 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TFPTP0C1Z6 253 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 NTSP30990 170 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 GJA4P35212 333 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 CTSKP43235 329 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 CCT3P49368 545 aaKnown RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 CRISP1P54107 249 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 RPS21P63220 83 aaKnown RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 MESP2Q0VG99 397 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 SGCGQ13326 291 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ENPP2Q13822 863 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 KRT33BQ14525 404 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 AGBL4Q5VU57 503 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 NIPAL1Q6NVV3 410 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TUBA3EQ6PEY2 450 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TMEM64Q6YI46 380 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 USP43Q70EL4 1123 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 AMER2Q8N7J2 671 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 FAM46DQ8NEK8 389 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 KBTBD8Q8NFY9 601 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 OR2L8Q8NGY9 312 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 OR52J3Q8NH60 311 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 UTP15Q8TED0 518 aaKnown RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 NR4A3Q92570 626 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 GGHQ92820 318 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF354BQ96LW1 612 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PRAP1Q96NZ9 151 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 MYOCQ99972 504 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 MENTQ9BUN1 341 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 MMP27Q9H306 513 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 FBRSQ9HAH7 460 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 AKIP1Q9NQ31 210 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 SEMA3GQ9NS98 782 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PRKAB1Q9Y478 270 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 HEBP2Q9Y5Z4 205 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 STON1Q9Y6Q2 735 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ZAR1LA6NP61 321 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 AIREO43918 545 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 MFN2O95140 757 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 VIPP01282 170 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 RPLP0P05388 317 aaKnown RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 BCHEP06276 602 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 HNRNPCP07910 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ALOX5P09917 674 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PIPP12273 146 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 DRD3P35462 400 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 AHRP35869 848 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 OPRL1P41146 370 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 SSR2P43308 183 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 KCNJ5P48544 419 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ERVK-21P61565 698 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 CSNK1G2P78368 415 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TGM3Q08188 693 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ITGADQ13349 1161 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ILKQ13418 452 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 SLC9A5Q14940 896 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PTGES3Q15185 160 aaKnown RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 NDUFA9Q16795 377 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TIGD6Q17RP2 521 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 DCST1Q5T197 706 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PRAMEF8Q5VWM4 474 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 PRAMEF7Q5VXH5 474 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 LAIR1Q6GTX8 287 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 FRMPD2BQ6IN97 320 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ZNF367Q7RTV3 350 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 ADGRF3Q8IZF5 1079 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 C2orf73Q8N5S3 287 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 HORMAD2Q8N7B1 307 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 C12orf76Q8N812 135 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-209ENST00000493732 AQP11Q8NBQ7 271 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 OR6Q1Q8NGQ2 317 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 BBS10Q8TAM1 723 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 SFXN5Q8TD22 340 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TMEM19Q96HH6 336 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 DHRS1Q96LJ7 313 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 C12orf66Q96MD2 445 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 CAMK1GQ96NX5 476 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 NIPSNAP1Q9BPW8 284 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 CDCA4Q9BXL8 241 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TMEM184CQ9NVA4 438 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 KLK4Q9Y5K2 254 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 DGKBQ9Y6T7 804 aa9.17□□□□□ -0.94
NPHP3-209ENST00000493732 TCF20Q9UGU0 1960 aaKnown RBP9.16□□□□□ -0.94
NPHP3-209ENST00000493732 A0A1W2PPV9 198 aa9.16□□□□□ -0.94
NPHP3-209ENST00000493732 PCDH17O14917 1159 aa9.16□□□□□ -0.94
NPHP3-209ENST00000493732 MID1O15344 667 aa9.16□□□□□ -0.94
NPHP3-209ENST00000493732 TBX6O95947 436 aaPredicted RBP9.16□□□□□ -0.94
NPHP3-209ENST00000493732 H1F0P07305 194 aaKnown RBP9.16□□□□□ -0.94
NPHP3-209ENST00000493732 OSMP13725 252 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms