RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 IGDCC3Q8IVU1 814 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CNTN4Q8IWV2 1026 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 TMEM132CQ8N3T6 1108 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 MORN4Q8NDC4 146 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 OR8K3Q8NH51 312 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 LINC01560Q8TB33 94 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 SLC2A12Q8TD20 617 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 ZNF721Q8TF20 911 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 KIAA1191Q96A73 305 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 SGCZQ96LD1 299 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 ALOXE3Q9BYJ1 711 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 LDAHQ9H6V9 325 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 DAPP1Q9UN19 280 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 DYRK1BQ9Y463 629 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 CLCA3PQ9Y6N3 262 aa12.18□□□□□ -0.46
USF1-206ENST00000491629 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.18□□□□□ -0.46
USF1-206ENST00000491629 ANK3Q12955 4377 aaKnown RBP12.18□□□□□ -0.46
USF1-206ENST00000491629 HSPB2A8KAH6 182 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 C17orf105B2RV13 164 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 HRKO00198 91 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 LDB3O75112 727 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 LRATO95237 230 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 P04436 131 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 IFNA16P05015 189 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 ENO2P09104 434 aaPredicted RBP12.17□□□□□ -0.46
USF1-206ENST00000491629 EPXP11678 715 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 GABRA1P14867 456 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PTMSP20962 102 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 GDF5P43026 501 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PLA2G16P53816 162 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 STXBP1P61764 594 aaKnown RBP12.17□□□□□ -0.46
USF1-206ENST00000491629 ID2Q02363 134 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 ASPHQ12797 758 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 HSPB2Q16082 182 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
USF1-206ENST00000491629 MSS51Q4VC12 460 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PIGGQ5H8A4 983 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PRAMEF20Q5VT98 475 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 DGAT2L6Q6ZPD8 337 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 CXorf67Q86X51 503 aaPredicted RBP12.17□□□□□ -0.46
USF1-206ENST00000491629 CIARTQ8N365 385 aaPredicted RBP12.17□□□□□ -0.46
USF1-206ENST00000491629 LRRC25Q8N386 305 aaPredicted RBP12.17□□□□□ -0.46
USF1-206ENST00000491629 TXLNBQ8N3L3 684 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 OR14A16Q8NHC5 309 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 NEIL3Q8TAT5 605 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PAQR8Q8TEZ7 354 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 ATL1Q8WXF7 558 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 FAR2Q96K12 515 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PRDM7Q9NQW5 492 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 PCDHGB3Q9Y5G1 929 aa12.17□□□□□ -0.46
USF1-206ENST00000491629 B3GALT2O43825 422 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 LY6G6DO95868 133 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 EPPINO95925 133 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 HEXAP06865 529 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 C1GALT1C1LP0DN25 315 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 PEX19P40855 299 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 SLC6A12P48065 614 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 TRPC1P48995 793 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 DCAF7P61962 342 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 KEAP1Q14145 624 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 SLBPQ14493 270 aaKnown RBP eCLIP12.16□□□□□ -0.46
USF1-206ENST00000491629 MPEG1Q2M385 716 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 ABHD17CQ6PCB6 329 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 OPN5Q6U736 354 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 TMIGD1Q6UXZ0 262 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 C9orf40Q8IXQ3 194 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 FBXW8Q8N3Y1 598 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 OR2L5Q8NG80 312 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 MAIP1Q8WWC4 291 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 DAZLQ92904 295 aaKnown RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 ANKRD9Q96BM1 317 aaPredicted RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 PDLIM5Q96HC4 596 aaKnown RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 MAPKAP1Q9BPZ7 522 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 WDR83Q9BRX9 315 aaKnown RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 RBSNQ9H1K0 784 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 EXO5Q9H790 373 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 ZFP64Q9NPA5 681 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 ACKR4Q9NPB9 350 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 ZNF490Q9ULM2 529 aaPredicted RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
USF1-206ENST00000491629 KCNE2Q9Y6J6 123 aa12.16□□□□□ -0.46
USF1-206ENST00000491629 NPEPPSL1A6NEC2 478 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 FAM47E-STBD1D6RA91 191 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 DVL2O14641 736 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 HRGP04196 525 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 IGKV3-11P04433 115 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 PGAM1P18669 254 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 TIMP3P35625 211 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 AGFG1P52594 562 aaKnown RBP12.15□□□□□ -0.46
USF1-206ENST00000491629 CRYZQ08257 329 aaKnown RBP12.15□□□□□ -0.46
USF1-206ENST00000491629 TEDDM1Q5T9Z0 273 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 SLC22A10Q63ZE4 541 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 GALNT7Q86SF2 657 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 GPATCH11Q8N954 259 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms