RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 TEX51A0A1B0GUA7 166 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 HLA-DQB1P01920 261 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 JUPP14923 745 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 POU3F3P20264 500 aaPredicted RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 FEN1P39748 380 aaKnown RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 SGSHP51688 502 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 LBX1P52954 281 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 MVDP53602 400 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 RRAS2P62070 204 aaPredicted RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ACSM2AQ08AH3 577 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ACSM2BQ68CK6 577 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ZNF852Q6ZMS4 543 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 GPR65Q8IYL9 337 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 OR4A15Q8NGL6 344 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 NFKBIDQ8NI38 313 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 TMEM203Q969S6 136 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 UPRTQ96BW1 309 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 NELL2Q99435 816 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 SEPT5Q99719 369 aaPredicted RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 RHCGQ9UBD6 479 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 NLKQ9UBE8 527 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 SMIM30A4D0T7 59 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 WASHC1A8K0Z3 465 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 TNFRSF21O75509 655 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 CBSLP0DN79 551 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 SDC2P34741 201 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 CBSP35520 551 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 CLDN20P56880 219 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ZNF177Q13360 481 aaPredicted RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 WSCD2Q2TBF2 565 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 LEXMQ3ZCV2 418 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 C1orf53Q5VUE5 145 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ABI3BPQ7Z7G0 1075 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 SLC51BQ86UW2 128 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 OR4M2Q8NGB6 313 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 MTERF1Q99551 399 aaKnown RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 RERGLQ9H628 205 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 C12orf10Q9HB07 376 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ZFYVE1Q9HBF4 777 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 LHX3Q9UBR4 397 aa18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 ZNF282Q9UDV7 671 aaPredicted RBP18.46■□□□□ 0.55
SNAPC3-206ENST00000490969 DSPPQ9NZW4 1301 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 PRAMEF33A0A0G2JMD5 474 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 FAM240BA0A1B0GVZ2 78 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 FAM227AF5H4B4 570 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 PRAMEF10O60809 474 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 EFEMP2O95967 443 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 FAM157BP0CG42 384 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 PRKAR1AP10644 381 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 MAPK12P53778 367 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF91Q05481 1191 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 DDX39BQ13838 428 aaKnown RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ELOAQ14241 798 aaKnown RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 CHRNA6Q15825 494 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 TMEM201Q5SNT2 666 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 GCNT6Q5T4J0 391 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ANXA8L1Q5VT79 327 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 LYPLAL1Q5VWZ2 237 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 RNF219Q5W0B1 726 aaPredicted RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 FBXO46Q6PJ61 603 aaPredicted RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 GRAMD2AQ8IUY3 354 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 Q8N402 240 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC6A18Q96N87 628 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 SAMD11Q96NU1 681 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 RETREG1Q9H6L5 497 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 DNAJC11Q9NVH1 559 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 EIF3KQ9UBQ5 218 aaKnown RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 NUP50Q9UKX7 468 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 RPL36Q9Y3U8 105 aaKnown RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ARRDC5A6NEK1 342 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ATXN7L2Q5T6C5 722 aaPredicted RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ZNF770Q6IQ21 691 aaPredicted RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 SKA2Q8WVK7 121 aaPredicted RBP18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 MYO19Q96H55 970 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 QRFPRQ96P65 431 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC12A9Q9BXP2 914 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 GLTPQ9NZD2 209 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 ENPP4Q9Y6X5 453 aa18.45■□□□□ 0.54
SNAPC3-206ENST00000490969 PDE4DIPQ5VU43 2346 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 GLYATL1P3A0A0U1RQE8 302 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 LYRM1O43325 122 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 CHRM5P08912 532 aaPredicted RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 HIST1H2AGP0C0S8 130 aaPredicted RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 ARSBP15848 533 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 HIST1H2ADP20671 130 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 EVI2BP34910 448 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 SLC11A2P49281 568 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 MRPL28Q13084 256 aaKnown RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 GPR17Q13304 367 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 CNKSR3Q6P9H4 555 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 USP30Q70CQ3 517 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 WDR53Q7Z5U6 358 aaPredicted RBP18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 TAGAPQ8N103 731 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 OR8H1Q8NGG4 311 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 AP3S1Q92572 193 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 ARMC5Q96C12 935 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 HIST1H2AHQ96KK5 128 aa18.44■□□□□ 0.54
SNAPC3-206ENST00000490969 GFM1Q96RP9 751 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms