RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CLK4Q9HAZ1 481 aaKnown RBP19.72■□□□□ 0.75
SND1-214ENST00000489417 SLC35C2Q9NQQ7 365 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 PRDM9Q9NQV7 894 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 SLC6A13Q9NSD5 602 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 SIDT1Q9NXL6 827 aaKnown RBP19.72■□□□□ 0.75
SND1-214ENST00000489417 SLC7A8Q9UHI5 535 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 PCDHGB4Q9UN71 923 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 L3MBTL1Q9Y468 752 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 VPS13AQ96RL7 3174 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 WASHC1A8K0Z3 465 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 NVLO15381 856 aaKnown RBP19.71■□□□□ 0.75
SND1-214ENST00000489417 CHST10O43529 356 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 FOXD2O60548 495 aaPredicted RBP19.71■□□□□ 0.75
SND1-214ENST00000489417 FRKP42685 505 aaPredicted RBP19.71■□□□□ 0.75
SND1-214ENST00000489417 PCBP4P57723 403 aaKnown RBP19.71■□□□□ 0.75
SND1-214ENST00000489417 SHC2P98077 582 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 RABL3Q5HYI8 236 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 OR52E8Q6IFG1 317 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 FAM180BQ6P0A1 224 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 ZNF621Q6ZSS3 439 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 HPS6Q86YV9 775 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 RNF148Q8N7C7 305 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 GOT1L1Q8NHS2 421 aaPredicted RBP19.71■□□□□ 0.75
SND1-214ENST00000489417 OR5P2Q8WZ92 322 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 PHF12Q96QT6 1004 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 CPPED1Q9BRF8 314 aaPredicted RBP19.71■□□□□ 0.75
SND1-214ENST00000489417 NDC1Q9BTX1 674 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 TRIM8Q9BZR9 551 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 SLAMF7Q9NQ25 335 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 PSME2Q9UL46 239 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 VPS4AQ9UN37 437 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 UNC13CQ8NB66 2214 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 CACNA1HO95180 2353 aa19.71■□□□□ 0.75
SND1-214ENST00000489417 ZNF749O43361 778 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 ERAL1O75616 437 aaKnown RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 ZCCHC18P0CG32 403 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 ME2P23368 584 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 NTSP30990 170 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 ARSFP54793 590 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 EEFSECP57772 596 aaKnown RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 MTPNP58546 118 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 SELPLGQ14242 412 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 B3GNT8Q7Z7M8 397 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 MMABQ96EY8 250 aaPredicted RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 ZBED6CLQ96FA7 236 aaPredicted RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 OR6C1Q96RD1 312 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 BBS4Q96RK4 519 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 SH3GL1Q99961 368 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 RPF2Q9H7B2 306 aaKnown RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 ACSS1Q9NUB1 689 aaPredicted RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 GIMAP4Q9NUV9 329 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 HCN3Q9P1Z3 774 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 ZNF282Q9UDV7 671 aaPredicted RBP19.7■□□□□ 0.74
SND1-214ENST00000489417 CD300AQ9UGN4 299 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 CLCA2Q9UQC9 943 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 ERVK-11Q9UQG0 969 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 ENTPD4Q9Y227 616 aa19.7■□□□□ 0.74
SND1-214ENST00000489417 H0YIG0 161 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 CYR61O00622 381 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 GDF9O60383 454 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 SORBS2O94875 1100 aaKnown RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 ABCB1P08183 1280 aaPredicted RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 RNH1P13489 461 aaKnown RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 CSTF2P33240 577 aaKnown RBP eCLIP19.69■□□□□ 0.74
SND1-214ENST00000489417 MANFP55145 182 aaKnown RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 HBA1P69905 142 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 ELF3P78545 371 aaPredicted RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 SIM1P81133 766 aaPredicted RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 ILKQ13418 452 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 SPATS1Q496A3 300 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 RBM44Q6ZP01 1051 aaKnown RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 TTLL10Q6ZVT0 673 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 METTL27Q8N6F8 245 aaPredicted RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 ZFP28Q8NHY6 868 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 ADAMTS18Q8TE60 1221 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 CCDC124Q96CT7 223 aaKnown RBP19.69■□□□□ 0.74
SND1-214ENST00000489417 MVB12AQ96EY5 273 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 TAS2R9Q9NYW1 312 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 NDOR1Q9UHB4 597 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 RARRES3Q9UL19 164 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 SCN3AQ9NY46 2000 aa19.69■□□□□ 0.74
SND1-214ENST00000489417 PRORSD1PA6NEY8 169 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 MYO1GB0I1T2 1018 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 AGRPO00253 132 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 DSCR3O14972 297 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 RFPL3O75679 317 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 E2F1Q01094 437 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 C16orf72Q14CZ0 275 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 MLC1Q15049 377 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 STPG1Q5TH74 334 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 PRAMEF17Q5VTA0 474 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 NET1Q7Z628 596 aaPredicted RBP19.68■□□□□ 0.74
SND1-214ENST00000489417 AGBL5Q8NDL9 886 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 CNRIP1Q96F85 164 aaPredicted RBP19.68■□□□□ 0.74
SND1-214ENST00000489417 AURKBQ96GD4 344 aaPredicted RBP19.68■□□□□ 0.74
SND1-214ENST00000489417 THUMPD3Q9BV44 507 aaKnown RBP19.68■□□□□ 0.74
SND1-214ENST00000489417 CDC14AQ9UNH5 594 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 SRPK3Q9UPE1 567 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 AP3M1Q9Y2T2 418 aa19.68■□□□□ 0.74
SND1-214ENST00000489417 ZNF780BQ9Y6R6 833 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms