RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF358Q9NW07 568 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 HPF1Q9NWY4 346 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 TBK1Q9UHD2 729 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 SH3BGRL2Q9UJC5 107 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 STK38LQ9Y2H1 464 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 KLF13Q9Y2Y9 288 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 YARS2Q9Y2Z4 477 aaKnown RBP8.52□□□□□ -1.05
HDAC6-232ENST00000489053 PCDHGB6Q9Y5F9 930 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 CCDC88CQ9P219 2028 aa8.52□□□□□ -1.05
HDAC6-232ENST00000489053 UNC79Q9P2D8 2635 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ESPL1Q14674 2120 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 DOPEY2Q9Y3R5 2298 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 MYOCOSA0A1B0GUC4 107 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 CLEC18AA5D8T8 446 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 LRRC14BA6NHZ5 514 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SMIM23A6NLE4 172 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 NPIPA5E9PKD4 350 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 FOXE1O00358 373 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 CYR61O00622 381 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 E2F3O00716 465 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SUPT7LO94864 414 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SEMA3DO95025 777 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 KRT6AP02538 564 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 KRT6BP04259 564 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 FAM58BPP0C7Q3 252 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ALOX15P16050 662 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ABOP16442 354 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ECHS1P30084 290 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 HMOX2P30519 316 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 DEKP35659 375 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 MAGEA12P43365 314 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 KRT6CP48668 564 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 HNRNPFP52597 415 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PMP22Q01453 160 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 TNFRSF17Q02223 184 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PLGLB1Q02325 96 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PCDH1Q08174 1060 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SLC29A2Q14542 456 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 KRTCAP3Q53RY4 240 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 CCNYL2Q5T2Q4 361 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 UBAP2Q5T6F2 1119 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 C1QL3Q5VWW1 255 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 HLA-DQA1Q5Y7H0 255 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 CLEC18BQ6UXF7 455 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF793Q6ZN11 406 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SLC29A4Q7RTT9 530 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 UBE3DQ7Z6J8 389 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 FJX1Q86VR8 437 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SLC22A9Q8IVM8 553 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 OR4N5Q8IXE1 308 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 GPALPP1Q8IXQ4 340 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 GSPT2Q8IYD1 628 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 EID3Q8N140 333 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ZCCHC7Q8N3Z6 543 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 L3MBTL4Q8NA19 623 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 POGLUT1Q8NBL1 392 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 CLEC18CQ8NCF0 446 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 MDS2Q8NDY4 140 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ACMSDQ8TDX5 336 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 TRPC4APQ8TEL6 797 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SELENOMQ8WWX9 145 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 GPR78Q96P69 363 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 CDK15Q96Q40 435 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 TAAR6Q96RI8 345 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 BARD1Q99728 777 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SORBS1Q9BX66 1292 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 IQCGQ9H095 443 aaKnown RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 TSPAN10Q9H1Z9 355 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PPCSQ9HAB8 311 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PFDN4Q9NQP4 134 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 VTI1BQ9UEU0 232 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PLEKHB1Q9UF11 243 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 ERRFI1Q9UJM3 462 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-232ENST00000489053 PCTPQ9UKL6 214 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 NPIPA1Q9UND3 350 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SLC12A4Q9UP95 1085 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 TSC22D4Q9Y3Q8 395 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 SCN3AQ9NY46 2000 aa8.51□□□□□ -1.05
HDAC6-232ENST00000489053 A8MT66 165 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 GOLGA8RI6L899 631 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 ACOT7O00154 380 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 WWP2O00308 870 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 PLPP1O14494 284 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 OR7A17O14581 309 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 NME2P1O60361 137 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 MAN1A2O60476 641 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 OR2J2O76002 312 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 SCELO95171 688 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 ESRRBO95718 433 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 GSTA1P08263 222 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 MYL2P10916 166 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 PYGBP11216 843 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 NME2P22392 152 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 ATP5F1P24539 256 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-232ENST00000489053 PIK3R1P27986 724 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 TRHRP34981 398 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-232ENST00000489053 STT3AP46977 705 aa8.5□□□□□ -1.05
HDAC6-232ENST00000489053 MAPK12P53778 367 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms