RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ZNF321PQ8N8H1 164 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 MNS1Q8NEH6 495 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 ISL2Q96A47 359 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 RGMAQ96B86 450 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 ANKRD9Q96BM1 317 aaPredicted RBP21.39■■□□□ 1.01
COL9A3-213ENST00000489045 CENPKQ9BS16 269 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 OR8D2Q9GZM6 311 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 IPPKQ9H8X2 491 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 TSC22D4Q9Y3Q8 395 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 TNPO3Q9Y5L0 923 aaKnown RBP21.39■■□□□ 1.01
COL9A3-213ENST00000489045 EML6Q6ZMW3 1958 aa21.39■■□□□ 1.01
COL9A3-213ENST00000489045 PRSS44E7EML9 344 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 FGF17O60258 216 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 UGDHO60701 494 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 OR2J2O76002 312 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 CTAGE8P0CG41 777 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 MAGEA12P43365 314 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 PIK3CGP48736 1102 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 RPS13P62277 151 aaKnown RBP21.38■■□□□ 1.01
COL9A3-213ENST00000489045 HSF1Q00613 529 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 Q6ZPB1 254 aaPredicted RBP21.38■■□□□ 1.01
COL9A3-213ENST00000489045 SPPL2CQ8IUH8 684 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 CTAGE4Q8IX94 777 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 GHDCQ8N2G8 530 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 POGLUT1Q8NBL1 392 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 SLC2A12Q8TD20 617 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 MYOTQ9UBF9 498 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 ERVK-11Q9UQG0 969 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 IKBKGQ9Y6K9 419 aa21.38■■□□□ 1.01
COL9A3-213ENST00000489045 H0YIV9 168 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 KLRC4-KLRK1H3BQV0 150 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 ZNHIT1O43257 154 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 PEX1O43933 1283 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 RFC3P40938 356 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 SERPINB9P50453 376 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 GPR85P60893 370 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 PHEXP78562 749 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 CPSF6Q16630 551 aaKnown RBP eCLIP21.37■■□□□ 1.01
COL9A3-213ENST00000489045 TAOK1Q7L7X3 1001 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 MRGPRGQ86SM5 289 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 OR4N5Q8IXE1 308 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 PTGR2Q8N8N7 351 aaPredicted RBP21.37■■□□□ 1.01
COL9A3-213ENST00000489045 REPS1Q96D71 796 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 MS4A12Q9NXJ0 267 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 RNF11Q9Y3C5 154 aa21.37■■□□□ 1.01
COL9A3-213ENST00000489045 A8MVJ9 347 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 WWP2O00308 870 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 TFECO14948 347 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ESRRAP11474 423 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ABOP16442 354 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 PTX3P26022 381 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 HK2P52789 917 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 HNRNPH2P55795 449 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 IGLV3-21P80748 117 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 TNFRSF17Q02223 184 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 GLE1Q53GS7 698 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 METTL2BQ6P1Q9 378 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 RPTNQ6XPR3 784 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 GPR180Q86V85 440 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 CHERPQ8IWX8 916 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 GPALPP1Q8IXQ4 340 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 SLC34A3Q8N130 599 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ZCCHC7Q8N3Z6 543 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ZNF808Q8N4W9 903 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 L3MBTL4Q8NA19 623 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 UHMK1Q8TAS1 419 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ASB15Q8WXK1 588 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 PHF21BQ96EK2 531 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 SCYL1Q96KG9 808 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 RASL10BQ96S79 203 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ZNF717Q9BY31 904 aaPredicted RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 RPF2Q9H7B2 306 aaKnown RBP21.36■■□□□ 1.01
COL9A3-213ENST00000489045 TIMMDC1Q9NPL8 285 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 HPF1Q9NWY4 346 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 XPR1Q9UBH6 696 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 PHF11Q9UIL8 331 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 ENTPD4Q9Y227 616 aa21.36■■□□□ 1.01
COL9A3-213ENST00000489045 POC1B-GALNT4F8VUJ3 575 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 PRKRAO75569 313 aaKnown RBP21.35■■□□□ 1.01
COL9A3-213ENST00000489045 OR6B1O95007 311 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 ETHE1O95571 254 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 TUBB4AP04350 444 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 RBP1P09455 135 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 PTGER1P34995 402 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 ARL1P40616 181 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-213ENST00000489045 SOX3P41225 446 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 ARFIP1P53367 373 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 RNF4P78317 190 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 ADORA2A-AS1P86434 159 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 ART3Q13508 389 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 C18orf63Q68DL7 685 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 IL20RBQ6UXL0 311 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 PSD4Q8NDX1 1056 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 OR8K3Q8NH51 312 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 WDR20Q8TBZ3 569 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 DCAKDQ8WVC6 231 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 DGAT2Q96PD7 388 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 CDK15Q96Q40 435 aa21.35■■□□□ 1.01
COL9A3-213ENST00000489045 NOL11Q9H8H0 719 aaKnown RBP21.35■■□□□ 1.01
COL9A3-213ENST00000489045 COPS7AQ9UBW8 275 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms