RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 KCMF1Q9P0J7 381 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 VPS29Q9UBQ0 182 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 ACTL7BQ9Y614 415 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 A0A0A6YYD5 115 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 A8MUA0 341 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 PPP6CO00743 305 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 FCHO1O14526 889 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 TRIM13O60858 407 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 SPAG7O75391 227 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 SOX11P35716 441 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 CLCN2P51788 898 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 MAPK12P53778 367 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 PLIN5Q00G26 463 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 SPIN4Q56A73 249 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 OR52E8Q6IFG1 317 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 IGFL2Q6UWQ7 119 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 ATCAYQ86WG3 371 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 C10orf107Q8IVU9 208 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 SHISA5Q8N114 240 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 HORMAD2Q8N7B1 307 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 RBMXL3Q8N7X1 1067 aaKnown RBP12.07□□□□□ -0.48
PHF1-210ENST00000488767 B3GNT7Q8NFL0 401 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 OR14A16Q8NHC5 309 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 PPP1R14CQ8TAE6 165 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 AGAP11Q8TF27 550 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 PCSK5Q92824 1860 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 VMP1Q96GC9 406 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 RBM18Q96H35 190 aaKnown RBP12.07□□□□□ -0.48
PHF1-210ENST00000488767 DGAT2Q96PD7 388 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 FAIM2Q9BWQ8 316 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 MRPL1Q9BYD6 325 aaKnown RBP12.07□□□□□ -0.48
PHF1-210ENST00000488767 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
PHF1-210ENST00000488767 TRAV17A0A0B4J275 112 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 A0A1B0GTL3 188 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 CDK2AP1O14519 115 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 PROM1O43490 865 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 OR10H2O60403 315 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 EEDO75530 441 aaKnown RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 ETHE1O95571 254 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 KLK1P06870 262 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 CELA2AP08217 269 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 BSGP35613 385 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 HNRNPFP52597 415 aaKnown RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 ACSM2AQ08AH3 577 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 ZNF169Q14929 603 aaPredicted RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 ACER2Q5QJU3 275 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 C6orf163Q5TEZ5 329 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 B3GNTL1Q67FW5 361 aaPredicted RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 ACSM2BQ68CK6 577 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 Q6ZS92 163 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 COMMD6Q7Z4G1 85 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 LGI4Q8N135 537 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 METTL4Q8N3J2 472 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 TMEM52Q8NDY8 209 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 TCP10LQ8TDR4 215 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 HAS2Q92819 552 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 ART5Q96L15 291 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 UTP23Q9BRU9 249 aaKnown RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 RNF32Q9H0A6 362 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 RRAGDQ9NQL2 400 aaPredicted RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 FARSBQ9NSD9 589 aaKnown RBP12.06□□□□□ -0.48
PHF1-210ENST00000488767 VTI1BQ9UEU0 232 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 PSME2Q9UL46 239 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 ATG4BQ9Y4P1 393 aa12.06□□□□□ -0.48
PHF1-210ENST00000488767 MED13Q9UHV7 2174 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 TRBV11-1A0A0K0K1C0 115 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 SERTM1A2A2V5 107 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 OR5H15A6NDH6 313 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 C17orf105B2RV13 164 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 TYROBPO43914 113 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 LDB3O75112 727 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 VPS4BO75351 444 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 GBAP04062 536 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 UROSP10746 265 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 PIK3R1P27986 724 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 SERPINB5P36952 375 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 HNRNPH2P55795 449 aaKnown RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 TRA2BP62995 288 aaKnown RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 FOLH1Q04609 750 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 PCLAFQ15004 111 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 COLEC12Q5KU26 742 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 SPDYAQ5MJ70 313 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 RPS19BP1Q86WX3 136 aaKnown RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 C1orf52Q8N6N3 182 aaKnown RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 MORN4Q8NDC4 146 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 CPT1CQ8TCG5 803 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 ELP5Q8TE02 316 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 PSMF1Q92530 271 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 ZIM3Q96PE6 472 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 HBEGFQ99075 208 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 ZNF717Q9BY31 904 aaPredicted RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 TRIM4Q9C037 500 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 C12orf65Q9H3J6 166 aaKnown RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 ZBTB20Q9HC78 741 aaPredicted RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 AGPAT4Q9NRZ5 378 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.05□□□□□ -0.48
PHF1-210ENST00000488767 ARGLU1Q9NWB6 273 aaPredicted RBP12.05□□□□□ -0.48
PHF1-210ENST00000488767 LUZP4Q9P127 313 aa12.05□□□□□ -0.48
PHF1-210ENST00000488767 SLC17A7Q9P2U7 560 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms