RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 ADGRD1Q6QNK2 874 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 RPS27LQ71UM5 84 aaKnown RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 GPR180Q86V85 440 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 ZCCHC7Q8N3Z6 543 aaKnown RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 OR14A16Q8NHC5 309 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 PTPMT1Q8WUK0 201 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 ANKRD9Q96BM1 317 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 OR8D2Q9GZM6 311 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 TSPAN10Q9H1Z9 355 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 EPB41L4BQ9H329 900 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 ZBTB26Q9HCK0 441 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 PSMC3IPQ9P2W1 217 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 SEC14L3Q9UDX4 400 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 A0A0A6YYD5 115 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 C17orf105B2RV13 164 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 LRRTM2O43300 516 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 STSP08842 583 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 CUL3Q13618 768 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 SLC29A2Q14542 456 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 MAPKAPK3Q16644 382 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 TEX35Q5T0J7 233 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 C1QL3Q5VWW1 255 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 FRG2Q64ET8 278 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 C18orf63Q68DL7 685 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 TTC19Q6DKK2 380 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-215ENST00000488494 HIST2H2BCQ6DN03 193 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 SLC25A25Q6KCM7 469 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 C16orf47Q6ZP98 133 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-215ENST00000488494 ZNF227Q86WZ6 799 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 OR4N5Q8IXE1 308 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 ZNF321PQ8N8H1 164 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 ZNF483Q8TF39 744 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-215ENST00000488494 DAZLQ92904 295 aaKnown RBP16.52■□□□□ 0.24
ITGB1-215ENST00000488494 FRG2BQ96QU4 278 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 RPF2Q9H7B2 306 aaKnown RBP16.52■□□□□ 0.24
ITGB1-215ENST00000488494 TRIM45Q9H8W5 580 aaPredicted RBP16.52■□□□□ 0.24
ITGB1-215ENST00000488494 MS4A12Q9NXJ0 267 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 VTI1BQ9UEU0 232 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 ATG4BQ9Y4P1 393 aa16.52■□□□□ 0.24
ITGB1-215ENST00000488494 POLEQ07864 2286 aa16.52■□□□□ 0.23
ITGB1-215ENST00000488494 UNC79Q9P2D8 2635 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 A0A1B0GTL3 188 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 ASPDHA6ND91 283 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 WIPF3A6NGB9 483 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 FOXE1O00358 373 aaPredicted RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 CDK2AP1O14519 115 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 TMPRSS11DO60235 418 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 ZFAND5O76080 213 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 NR2F6P10588 404 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 TNNI3P19429 210 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 BSGP35613 385 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 SSR4P51571 173 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 ARFIP1P53367 373 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 IGLV3-21P80748 117 aaPredicted RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 PLIN5Q00G26 463 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 HSDL2Q6YN16 418 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 TIFABQ6ZNK6 161 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 NUDT13Q86X67 352 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 CYP4Z2PQ8N1L4 340 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 TMEM151AQ8N4L1 468 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 TMEM156Q8N614 296 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 FAM98AQ8NCA5 519 aaKnown RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 MORN4Q8NDC4 146 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 OR4F6Q8NGB9 312 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 SLC2A12Q8TD20 617 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 TMEM125Q96AQ2 219 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 MTFMTQ96DP5 389 aaKnown RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 SERPINI1Q99574 410 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 NTMT1Q9BV86 223 aa16.51■□□□□ 0.23
ITGB1-215ENST00000488494 DDX31Q9H8H2 851 aaKnown RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 LIN28AQ9H9Z2 209 aaKnown RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 LYARQ9NX58 379 aaKnown RBP16.51■□□□□ 0.23
ITGB1-215ENST00000488494 SVILO95425 2214 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 IQANK1A0A1B0GTG1 560 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 GOLGA8RI6L899 631 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 OR2J2O76002 312 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 WISP2O76076 250 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 SEMA3DO95025 777 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 OTCP00480 354 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 GBAP04062 536 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 FAM58BPP0C7Q3 252 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 COX7A2P14406 83 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 TSPAN8P19075 237 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 TLX1P31314 330 aaPredicted RBP16.5■□□□□ 0.23
ITGB1-215ENST00000488494 BUD31P41223 144 aaPredicted RBP16.5■□□□□ 0.23
ITGB1-215ENST00000488494 STT3AP46977 705 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 PER3P56645 1201 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 ALDH6A1Q02252 535 aaKnown RBP16.5■□□□□ 0.23
ITGB1-215ENST00000488494 FOLH1Q04609 750 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 IFT88Q13099 833 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 GGTA1PQ4G0N0 100 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 SGO1Q5FBB7 561 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 FAM219BQ5XKK7 198 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 LETMD1Q6P1Q0 360 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 CYP20A1Q6UW02 462 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 FJX1Q86VR8 437 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 DGAT2Q96PD7 388 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 ELOVL6Q9H5J4 265 aa16.5■□□□□ 0.23
ITGB1-215ENST00000488494 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms