RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PDSS2Q86YH6 399 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 DTWD2Q8NBA8 298 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ADCY4Q8NFM4 1077 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 OR5AK3PQ8NH89 298 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 SUN3Q8TAQ9 357 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NETO1Q8TDF5 533 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 POP5Q969H6 163 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NCLNQ969V3 563 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 FAM162AQ96A26 154 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NEURL3Q96EH8 262 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 CNRIP1Q96F85 164 aaPredicted RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 TCTN2Q96GX1 697 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 C10orf90Q96M02 699 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF285Q96NJ3 590 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 PRDM9Q9NQV7 894 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 LRIT1Q9P2V4 623 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 PHF11Q9UIL8 331 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 SLC22A7Q9Y694 548 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 IGHV1OR21-1A0A087WYE8 117 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 RNF103-CHMP3A0A140T963 221 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 A0A1B0GTQ1 180 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 B3GALT2O43825 422 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 KIF1CO43896 1103 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 B4GALT2O60909 372 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 KRT75O95678 551 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 FCGR1AP12314 374 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF10P21506 573 aaPredicted RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 NTSP30990 170 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 HOXD11P31277 338 aaPredicted RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 PCGF2P35227 344 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 SOAT1P35610 550 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CDK9P50750 372 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 LIM2P55344 173 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 HSPB3Q12988 150 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 PRTGQ2VWP7 1150 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 DEFB110Q30KQ9 67 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 SFT2D3Q587I9 215 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ZC3H12BQ5HYM0 836 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ENPP6Q6UWR7 440 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 FAM92BQ6ZTR7 304 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 PRSS41Q7RTY9 318 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 RNF130Q86XS8 419 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ANKFN1Q8N957 763 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CATSPER1Q8NEC5 780 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CD180Q99467 661 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ASPSCR1Q9BZE9 553 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 EPB41L1Q9H4G0 881 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 GLIPR2Q9H4G4 154 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 RAD21L1Q9H4I0 556 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 LYRM4Q9HD34 91 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 NLGN3Q9NZ94 848 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 DAPP1Q9UN19 280 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 GALR3O60755 368 aaPredicted RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 DNAJB6O75190 326 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 SERPINA1P01009 418 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 EIF2S1P05198 315 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CTSBP07858 339 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 RAP2AP10114 183 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ETFAP13804 333 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ACADSP16219 412 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 GLB1P16278 677 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ATP6V1C1P21283 382 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 FASP25445 335 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 HOXD12P35452 270 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CHI3L1P36222 383 aaPredicted RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 GPR3P46089 330 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CCT8P50990 548 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CRYBA2P53672 197 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 EEF1A2Q05639 463 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 DUSP2Q05923 314 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 TAF11Q15544 211 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ATP6AP1Q15904 470 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 AMIGO2Q86SJ2 522 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 EID3Q8N140 333 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CARFQ8N187 725 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ZFP28Q8NHY6 868 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 SAP25Q8TEE9 199 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 PIGKQ92643 395 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF681Q96N22 645 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF570Q96NI8 536 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CSF3RQ99062 836 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 SEPHS2Q99611 448 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CCDC3Q9BQI4 270 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 UGT2B28Q9BY64 529 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 NLNQ9BYT8 704 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 SEMA6AQ9H2E6 1030 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 TMEM38AQ9H6F2 299 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 ZSCAN32Q9NX65 697 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 RAPGEFL1Q9UHV5 662 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 CNOT11Q9UKZ1 510 aaKnown RBP8.92□□□□□ -0.98
SF3B1-211ENST00000487698 DTNAQ9Y4J8 743 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 V9GYQ6 96 aa8.92□□□□□ -0.98
SF3B1-211ENST00000487698 MN1Q10571 1320 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-211ENST00000487698 KMT2EQ8IZD2 1858 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 IGHV5-51A0A0C4DH38 117 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 A0A1W2PS29 197 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 TPST1O60507 370 aa8.91□□□□□ -0.98
SF3B1-211ENST00000487698 SRPX2O60687 465 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms